Ciona intestinalis (yellow sea squirt): 778760
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Entry
778760 CDS
T01056
Symbol
smoothened
Name
(RefSeq) smoothened protein
KO
K06226
smoothened
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cin04030
]
778760 (smoothened)
G protein-coupled receptors [BR:
cin04030
]
Frizzled / Smoothened family
778760 (smoothened)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
778760
NCBI-ProteinID:
NP_001071819
Ensembl:
ENSCING00000001387
UniProt:
Q4H2S9
LinkDB
All DBs
AA seq
691 aa
AA seq
DB search
MAAGNSTTAAPSLLDLFNQQPQCNKPSQTGCVDLGNTTCFGSDLPYSQTSFELVTDADTL
AGVKEKLLLWSGIRAVPLCWDAIQPLLCSVYFPECGENKIQLIDRKVCQATRQPCKIVEV
EYGWPDFLRCDNNDVYADQCESPSTKLLKFNASGCEPPLMATTNPASYYDGVDGCGLQCM
NPLFNEQQHVDMHVFIAVLAGLTCICTLFAMLSFFVDWKNSNKYPARIIFYINLCFFMAC
IGWLAQFFSNARNEIVCRRDGTMRLGEPVGTGESPSCIVIFVLVYFFLMAGIIWFDILSY
SWFIMYKALNTRKDPLVGKTRKFHLAAWCIPFVLVLACLGVSQVDGDSMSGICFIGYKNH
MYRVGFLLVPVGLVLFIAGFFLLRGLAALFSLKNQQSGLLSDSAVSKITWTMARIGIFTF
IAFVFVFITFAVHVYELTHQALWEASFRDFIKCEANVTILETLSGTPVVCELHNRPSIAL
MKLNLVALFGTGIAMSTWVWTRASALNWRRFWFKLIGRSDNEMKRIRHRSRMIAKAFANR
HARGCQSNLDKHDDEIEYSEHTFTHQDPLGMNFDLHSVSQEMSSSWVRNVPNMVKRRGGM
LPMEQPHDNVEDLNQPGLWAVSQYIDGPQLKQKSKPIQNKRNTKLKSHDDTFIGTSPYNY
RLDQPKQQIKVNDNDVGAAFQPPGVLPTLPE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagctggtaacagcacaactgcagccccatcgttactggatctttttaaccaacaa
ccacaatgtaataaaccttcacaaactggatgtgtcgatcttggaaatacgacgtgtttt
ggatccgatctcccatattcacaaacgtcatttgaactggttactgatgctgatacattg
gctggtgtaaaagaaaagttgctgctttggtcaggcatccgtgcagtacctctatgctgg
gatgcaatccaacctcttctatgctctgtgtacttccctgaatgtggagaaaacaaaatt
caacttattgatcgcaaagtttgccaagccaccagacaaccatgtaaaatagtggaggtt
gaatatgggtggccagatttcctaagatgtgataataatgatgtttatgcagatcaatgt
gagtctccatccacaaagttgttaaaattcaatgcatctggatgtgaacccccactaatg
gcaacaactaaccctgcctcatattatgatggtgtagatggctgtggcttgcaatgtatg
aacccattatttaatgaacaacaacatgttgatatgcatgtattcattgctgtgttggca
gggttgacttgcatatgtactttatttgcgatgctttcattctttgttgattggaaaaac
tccaacaaatacccggcccgtattatattctacatcaacttgtgtttcttcatggcttgc
attgggtggttggctcaattcttctccaatgcccgaaatgagattgtgtgtaggagagat
ggaacaatgaggttgggggaacctgttggaacaggtgaatccccatcttgcatagtcatc
tttgtgttggtttatttcttcttgatggccggcattatatggtttgatatcctctcatat
tcgtggtttattatgtacaaggcactcaatacacgcaaagatccgcttgtagggaagact
cgcaagttccacctagcggcgtggtgcattccgtttgtgttggtacttgcttgtcttgga
gtatcgcaggttgatggagattctatgagtggaatatgctttattggatacaagaatcat
atgtacagagttgggtttctgttggtccctgtcggtcttgttttgttcattgctggtttt
ttccttcttcgaggattagctgcgttattctcattgaagaaccaacaatctggattgtta
agtgacagtgctgtatcgaagataacgtggaccatggctagaataggtatctttaccttc
attgcatttgtgttcgtattcatcacgtttgccgtccatgtttatgagttgacgcatcaa
gctttatgggaggctagcttcagggactttatcaaatgtgaagccaacgttaccatcctt
gagaccttaagtggaacccctgtagtttgtgagttgcacaaccgaccaagcattgcattg
atgaagttgaacttggtagctttgtttggtacagggatagccatgagcacgtgggtgtgg
acgagagcatcagctttaaactggaggaggttctggttcaagttgatcggtcgaagcgac
aatgaaatgaaaaggattcgtcatagaagtcggatgatcgctaaagctttcgcgaatcgg
cacgcacgtggctgtcaatcaaacctggataaacacgatgacgaaattgaatacagcgaa
cacacgttcacacaccaagatccacttgggatgaacttcgacctccacagtgtatcgcag
gaaatgtcatcaagttgggtccgtaacgtgccaaacatggtgaagaggagaggtgggatg
ttgccaatggaacaacctcatgataatgtggaggatttgaatcaacctgggttgtgggct
gtgtcgcaatatattgacgggccgcagttgaaacagaaatcaaaaccgatccaaaataaa
cgaaacacaaagttaaagagccatgatgacacgtttatcggaacttctccatataactac
agactggatcaaccgaagcaacaaattaaagttaacgacaacgacgtcggggctgctttt
caaccaccaggtgtcctacctaccctccctgaataa
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