Ciona intestinalis (yellow sea squirt): 778762
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Entry
778762 CDS
T01056
Symbol
snail
Name
(RefSeq) transcription factor protein
KO
K05706
snail 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778762 (snail)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
778762 (snail)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-H2C2_2
zf-C2H2_jaz
zf-met
C2CH-3rd_BIRD-IDD
zf-C2H2_16
Zn_SUZ12
zf-C2H2_15
C2H2-zf_KIN17
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
778762
NCBI-ProteinID:
NP_001071821
Ensembl:
ENSCING00000008903
UniProt:
Q4H2S7
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All DBs
Position
3:5679284..5682504
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AA seq
584 aa
AA seq
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MTSVEPMLYQGKHAVQKNEGESTRPCTLSGDDSFYCSGESTNSTSSPTSSITSSRSCGPD
SDEGFPRQDDLDLRDKASKNLQHSVELFCPIKSKSVDHDNDLMPMDLSCKKRTFPKQNCK
TASMPKTSPTIKSEPIDDSPASLTRNAPPSSMPSVSPPSSNITREFPPSMFPSWPYFSTP
ITSSAGGFPSFPSSYIAGKYLHPALFLPPPATSCQTVPTNSPLGFSVGNSMLPGLHQLAA
SHFQPSMIKPVAQPQGVPQEQISLNHDDQKFAQNSPQPRFSPTNLVQDPSLLAEFARVFS
RQVEQFRPKPGFEENNTKNQNSERRRKNAKPLKISADVSPPQPQLNDMRSISFKDLPTMV
SQTHDHNAFYGAQKNRQELKRKSSGEDNSESPSGKKVCLNSKTTWRQIDAPAFQISDAIE
EQNKTPQPVSFKPCRIPCTECGRTYATIGALAKHAKTHEDPESGSKFNCKICKKECSSLG
ALRMHIRTHTLPCECHICGKAFSRTWLLQGHIRTHTGEKPYQCTVCSRAFADRSNLRAHM
QTHETVKRYSCVTCEKTFSRISLLKRHQVHCETASQTAQRKTAS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgtcgagcccatgctttatcaaggcaagcacgccgttcagaaaaatgaaggc
gaatctacccgtccttgcactttgagtggagatgacagtttttactgcagcggcgaatca
acaaattcgacgtcatctcccacgtcatccattacgtcatcgcgttcatgtggacctgac
agcgacgaaggttttccgagacaggatgacttggatttgcgtgacaaagccagcaaaaac
ttgcaacatagcgttgagcttttttgccctattaagagcaagtcagttgatcatgataac
gatttaatgcctatggatctctcgtgcaaaaagagaactttcccaaaacaaaattgcaaa
actgctagcatgcctaaaacgagcccaaccataaaatcagaaccgattgatgactctcca
gcttcacttacacgcaacgctccaccttcaagtatgccttccgtttcacccccttcatca
aacatcacacgagaatttccaccctctatgtttccatcatggccttatttttccactcca
ataacttcaagcgcaggtggatttccgtcttttccgtcgtcctatattgctggaaaatat
cttcatccagcgttattccttccaccaccagcgacgtcttgccaaaccgtcccaaccaac
agccctctcggtttttctgtaggaaattccatgctgccaggacttcaccagctcgcagct
agccatttccaaccatcaatgatcaaaccagttgctcagccacagggtgtaccgcaagag
cagatttcgctcaatcacgatgaccagaagttcgctcaaaattccccacagcctcggttt
tccccgaccaacctggtccaagacccttctctgttagctgagtttgcacgggttttcagc
cgacaagtcgaacagttccgcccaaaaccaggtttcgaggaaaacaacacgaagaatcaa
aactcagagcgtcgccgcaaaaatgcgaagccgttgaagatttccgctgatgtatcgcca
ccacaacctcaacttaacgacatgcgatcaatttcgtttaaagatttacccaccatggtt
tctcaaactcacgaccacaacgccttctacggagcgcagaaaaaccgacaggaactgaag
agaaaatcctctggcgaagataattctgaaagtccatctggaaaaaaggtatgcttgaat
tccaaaactacttggaggcaaattgacgcaccggcgtttcagatatctgatgcaattgaa
gaacaaaataaaactccgcagcctgtcagttttaaaccatgtcgtattccatgtactgaa
tgtggaagaacgtacgcgaccatcggtgccctcgctaaacacgccaaaacacacgaggac
ccggaatctggtagcaaattcaattgcaaaatatgcaagaaagagtgcagttctcttgga
gcacttcgaatgcacatccgcacccatacgcttccgtgcgaatgccatatttgtggtaaa
gcgttctcacgtacctggctgttgcagggacacatacgcacacataccggtgagaaacca
taccaatgcactgtgtgctctagggctttcgccgaccgatcaaaccttcgtgctcatatg
caaactcacgaaactgttaaacgatacagctgtgttacctgcgagaaaacgttctctcgg
atttcgttgctaaaacgtcaccaagtacattgtgaaacagcctcacaaactgcacaacgc
aagacagcatcctaa
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