KEGG   Ciona intestinalis (yellow sea squirt): 778762
Entry
778762            CDS       T01056                                 
Symbol
snail
Name
(RefSeq) transcription factor protein
  KO
K05706  snail 2
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cin03000]
    778762 (snail)
Transcription factors [BR:cin03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    778762 (snail)
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-C2H2_6 zf-H2C2_2 zf-C2H2_jaz zf-met C2CH-3rd_BIRD-IDD zf-C2H2_16 Zn_SUZ12 zf-C2H2_15 C2H2-zf_KIN17 zf-H2C2_5
Other DBs
NCBI-GeneID: 778762
NCBI-ProteinID: NP_001071821
Ensembl: ENSCING00000008903
UniProt: Q4H2S7
LinkDB
Position
3:5679284..5682504
AA seq 584 aa
MTSVEPMLYQGKHAVQKNEGESTRPCTLSGDDSFYCSGESTNSTSSPTSSITSSRSCGPD
SDEGFPRQDDLDLRDKASKNLQHSVELFCPIKSKSVDHDNDLMPMDLSCKKRTFPKQNCK
TASMPKTSPTIKSEPIDDSPASLTRNAPPSSMPSVSPPSSNITREFPPSMFPSWPYFSTP
ITSSAGGFPSFPSSYIAGKYLHPALFLPPPATSCQTVPTNSPLGFSVGNSMLPGLHQLAA
SHFQPSMIKPVAQPQGVPQEQISLNHDDQKFAQNSPQPRFSPTNLVQDPSLLAEFARVFS
RQVEQFRPKPGFEENNTKNQNSERRRKNAKPLKISADVSPPQPQLNDMRSISFKDLPTMV
SQTHDHNAFYGAQKNRQELKRKSSGEDNSESPSGKKVCLNSKTTWRQIDAPAFQISDAIE
EQNKTPQPVSFKPCRIPCTECGRTYATIGALAKHAKTHEDPESGSKFNCKICKKECSSLG
ALRMHIRTHTLPCECHICGKAFSRTWLLQGHIRTHTGEKPYQCTVCSRAFADRSNLRAHM
QTHETVKRYSCVTCEKTFSRISLLKRHQVHCETASQTAQRKTAS
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgacctccgtcgagcccatgctttatcaaggcaagcacgccgttcagaaaaatgaaggc
gaatctacccgtccttgcactttgagtggagatgacagtttttactgcagcggcgaatca
acaaattcgacgtcatctcccacgtcatccattacgtcatcgcgttcatgtggacctgac
agcgacgaaggttttccgagacaggatgacttggatttgcgtgacaaagccagcaaaaac
ttgcaacatagcgttgagcttttttgccctattaagagcaagtcagttgatcatgataac
gatttaatgcctatggatctctcgtgcaaaaagagaactttcccaaaacaaaattgcaaa
actgctagcatgcctaaaacgagcccaaccataaaatcagaaccgattgatgactctcca
gcttcacttacacgcaacgctccaccttcaagtatgccttccgtttcacccccttcatca
aacatcacacgagaatttccaccctctatgtttccatcatggccttatttttccactcca
ataacttcaagcgcaggtggatttccgtcttttccgtcgtcctatattgctggaaaatat
cttcatccagcgttattccttccaccaccagcgacgtcttgccaaaccgtcccaaccaac
agccctctcggtttttctgtaggaaattccatgctgccaggacttcaccagctcgcagct
agccatttccaaccatcaatgatcaaaccagttgctcagccacagggtgtaccgcaagag
cagatttcgctcaatcacgatgaccagaagttcgctcaaaattccccacagcctcggttt
tccccgaccaacctggtccaagacccttctctgttagctgagtttgcacgggttttcagc
cgacaagtcgaacagttccgcccaaaaccaggtttcgaggaaaacaacacgaagaatcaa
aactcagagcgtcgccgcaaaaatgcgaagccgttgaagatttccgctgatgtatcgcca
ccacaacctcaacttaacgacatgcgatcaatttcgtttaaagatttacccaccatggtt
tctcaaactcacgaccacaacgccttctacggagcgcagaaaaaccgacaggaactgaag
agaaaatcctctggcgaagataattctgaaagtccatctggaaaaaaggtatgcttgaat
tccaaaactacttggaggcaaattgacgcaccggcgtttcagatatctgatgcaattgaa
gaacaaaataaaactccgcagcctgtcagttttaaaccatgtcgtattccatgtactgaa
tgtggaagaacgtacgcgaccatcggtgccctcgctaaacacgccaaaacacacgaggac
ccggaatctggtagcaaattcaattgcaaaatatgcaagaaagagtgcagttctcttgga
gcacttcgaatgcacatccgcacccatacgcttccgtgcgaatgccatatttgtggtaaa
gcgttctcacgtacctggctgttgcagggacacatacgcacacataccggtgagaaacca
taccaatgcactgtgtgctctagggctttcgccgaccgatcaaaccttcgtgctcatatg
caaactcacgaaactgttaaacgatacagctgtgttacctgcgagaaaacgttctctcgg
atttcgttgctaaaacgtcaccaagtacattgtgaaacagcctcacaaactgcacaacgc
aagacagcatcctaa

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