Ciona intestinalis (yellow sea squirt): 778768
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Entry
778768 CDS
T01056
Symbol
srf
Name
(RefSeq) transcription factor protein
KO
K04378
serum response factor
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778768 (srf)
Transcription factors [BR:
cin03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
778768 (srf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
RGS12_us1
Motif
Other DBs
NCBI-GeneID:
778768
NCBI-ProteinID:
NP_001071826
Ensembl:
ENSCING00000018042
UniProt:
Q4H2R3
LinkDB
All DBs
AA seq
335 aa
AA seq
DB search
MLKRTSLRSITNKMNNLKRTVVMAGLDNHDDEHYDTDDSKDDVSSHDSRSSTPMQKPGKK
TRGRVKINMEFIENKLRRYTTFSKRKSGIMKKAHELATLTGTQVMLLVASETGHVYTFAT
RKLQPILSSEAGKQLIQTCLNSPDTNETNVQSSQQDDQRMSAQGFEEPELSYAPPDDTKD
GLLQKTYHILNAISAQQHDEPTSRQHQNNIPSNTPVNLVTMNNEHKTPTSFTLLPPSSSY
EHQAVQLSSTPPSVRMQMLPVSHDVVSTTTTMPNQPQHILTRTSDDGRLAFLNSYNNLQR
PLPGVQPILLASSGSLQLPAGQVVFDQANNRKSAR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacgtacaagtttgcgatcaattaccaacaaaatgaataatttgaaacgtact
gttgttatggctggattagacaaccacgacgatgaacattacgacaccgacgattcgaaa
gacgacgtttcaagccacgattcgcgttcaagcacacctatgcaaaaacctggtaaaaaa
acaagaggtcgcgttaaaattaatatggaatttattgaaaataagctgcgaagatataca
actttcagtaaaagaaaatcaggaataatgaaaaaggcgcatgagttagctacattaacg
ggcacgcaagtgatgttactcgtggcaagcgaaacaggacatgtttacacgttcgccaca
cgaaagttacaacccatattatcaagtgaagcaggcaaacaactaatccaaacttgtctc
aactcgcccgacacgaacgaaacgaacgtccaaagttcgcaacaggatgatcaacgcatg
agcgcacaggggttcgaggagcccgagctatcgtacgcaccccccgatgatacaaaggat
ggattattgcagaagacctatcatatattgaatgcaatctcggcccaacagcatgatgaa
ccaacatcaaggcaacaccagaacaacataccttccaacacccctgttaatttggtcacg
atgaacaacgaacataaaacgccgacgtcattcaccctcctccccccatcatcaagttac
gagcaccaagcggtccaactttcttccaccccccctagtgttcgtatgcagatgttaccc
gtgtcacatgacgtcgtttccacaacaaccaccatgcccaaccaaccgcaacatatactc
actcgtacatcggacgacggacgtctggctttcctcaactcgtacaacaatctacaacgt
cctttacctggtgtccaaccgatattactagccagctctggttcgcttcagttacctgca
ggtcaggttgtgttcgatcaagcaaacaatcgaaagtcagctcgttag
DBGET
integrated database retrieval system
