Ciona intestinalis (yellow sea squirt): 778773
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Entry
778773 CDS
T01056
Symbol
tcf/lef
Name
(RefSeq) transcription factor protein
KO
K04491
transcription factor 7-like 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
778773 (tcf/lef)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778773 (tcf/lef)
Transcription factors [BR:
cin03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
778773 (tcf/lef)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
778773
NCBI-ProteinID:
NP_001071831
Ensembl:
ENSCING00000002003
UniProt:
Q4H2Q5
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All DBs
Position
6:complement(116948..142104)
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AA seq
351 aa
AA seq
DB search
MPQLNSDEAANDEPKTYNDERVGEEDERGWHENDELDNIKGDLVEEEDRDPHRRQSYDVP
AKVNSRHRDSSHRSTDDLDRDLPSDIASSRPNFPYLQQDIGAAIALNQQSLLSSLPSSSQ
VPYNPYAYHHFLYGTPSPTDIDGKPGLPRHNDVPAMYPLPGQLGQIPNPLSPWGPTSPTP
FICTASAMAGMLRYPYPFASQFTSTSGGMSAITPFPLVPPHVSGMHSTMIPHPAMALPGH
LPNGHNQSKGGVDKKNFGPEPGSKKREKGDKPSRPYVKKPLNAFMLYMKEQRAKVVAECT
LKESAAINQILGRKWHSLNREEQQKYYEMARKERQLHQQMFPGWSARDNYW
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagttaaactcggatgaagctgccaatgatgagccaaaaacctataacgatgaa
agggtaggcgaagaggacgaacgagggtggcatgaaaatgatgaacttgacaacataaag
ggtgatttagtcgaggaagaagacagagacccacacaggcgacaatcttacgatgttccg
gcaaaagtaaactctcgacacagagattccagccacagaagtacagatgatttagacaga
gatcttccaagtgatatagcatcatcacgtccaaacttcccttatcttcagcaagacatt
ggagctgctattgctttaaaccagcagtcgttgttgtcgtctctaccatcgtctagtcaa
gtgccttataacccttatgcatatcaccacttcttgtatggtacaccttcccctacagat
atagatgggaaaccaggtttaccacgacataatgatgtaccagctatgtacccactacct
ggtcaacttggtcaaatacctaacccacttagtccatggggaccaactagcccaacacca
ttcatatgtactgctagtgctatggcgggcatgttgcgatatccatatccatttgcatca
caatttacatcaacttcgggtggtatgagtgctataacaccttttccactggtgccccct
catgttagtggcatgcattccactatgataccacaccctgctatggcattacctggtcat
ttacctaatggtcacaaccaaagtaaagggggtgtagataaaaaaaatttcggacctgaa
cctggctcaaagaaacgcgaaaaaggcgacaaaccaagtcggccatatgtgaagaaacca
ctcaatgcattcatgctctatatgaaggaacaacgggcaaaagtggtcgctgaatgcacg
ctgaaagaaagtgcggcaatcaaccaaatacttggaagaaagtggcacagtcttaaccgt
gaagagcaacaaaaatattacgagatggctcgaaaagaacgtcaacttcaccaacagatg
tttccaggttggagtgccagagataattattggtaa
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