KEGG   Ciona intestinalis (yellow sea squirt): 778773
Entry
778773            CDS       T01056                                 
Symbol
tcf/lef
Name
(RefSeq) transcription factor protein
  KO
K04491  transcription factor 7-like 2
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:cin00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    778773 (tcf/lef)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cin03000]
    778773 (tcf/lef)
Transcription factors [BR:cin03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG TCF-1
    778773 (tcf/lef)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 778773
NCBI-ProteinID: NP_001071831
Ensembl: ENSCING00000002003
UniProt: Q4H2Q5
LinkDB
Position
6:complement(116948..142104)
AA seq 351 aa
MPQLNSDEAANDEPKTYNDERVGEEDERGWHENDELDNIKGDLVEEEDRDPHRRQSYDVP
AKVNSRHRDSSHRSTDDLDRDLPSDIASSRPNFPYLQQDIGAAIALNQQSLLSSLPSSSQ
VPYNPYAYHHFLYGTPSPTDIDGKPGLPRHNDVPAMYPLPGQLGQIPNPLSPWGPTSPTP
FICTASAMAGMLRYPYPFASQFTSTSGGMSAITPFPLVPPHVSGMHSTMIPHPAMALPGH
LPNGHNQSKGGVDKKNFGPEPGSKKREKGDKPSRPYVKKPLNAFMLYMKEQRAKVVAECT
LKESAAINQILGRKWHSLNREEQQKYYEMARKERQLHQQMFPGWSARDNYW
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgcctcagttaaactcggatgaagctgccaatgatgagccaaaaacctataacgatgaa
agggtaggcgaagaggacgaacgagggtggcatgaaaatgatgaacttgacaacataaag
ggtgatttagtcgaggaagaagacagagacccacacaggcgacaatcttacgatgttccg
gcaaaagtaaactctcgacacagagattccagccacagaagtacagatgatttagacaga
gatcttccaagtgatatagcatcatcacgtccaaacttcccttatcttcagcaagacatt
ggagctgctattgctttaaaccagcagtcgttgttgtcgtctctaccatcgtctagtcaa
gtgccttataacccttatgcatatcaccacttcttgtatggtacaccttcccctacagat
atagatgggaaaccaggtttaccacgacataatgatgtaccagctatgtacccactacct
ggtcaacttggtcaaatacctaacccacttagtccatggggaccaactagcccaacacca
ttcatatgtactgctagtgctatggcgggcatgttgcgatatccatatccatttgcatca
caatttacatcaacttcgggtggtatgagtgctataacaccttttccactggtgccccct
catgttagtggcatgcattccactatgataccacaccctgctatggcattacctggtcat
ttacctaatggtcacaaccaaagtaaagggggtgtagataaaaaaaatttcggacctgaa
cctggctcaaagaaacgcgaaaaaggcgacaaaccaagtcggccatatgtgaagaaacca
ctcaatgcattcatgctctatatgaaggaacaacgggcaaaagtggtcgctgaatgcacg
ctgaaagaaagtgcggcaatcaaccaaatacttggaagaaagtggcacagtcttaaccgt
gaagagcaacaaaaatattacgagatggctcgaaaagaacgtcaacttcaccaacagatg
tttccaggttggagtgccagagataattattggtaa

DBGET integrated database retrieval system