Ciona intestinalis (yellow sea squirt): 778788
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Entry
778788 CDS
T01056
Symbol
uhrf2
Name
(RefSeq) UHRF2 protein
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
778788 (uhrf2)
03036 Chromosome and associated proteins [BR:
cin03036
]
778788 (uhrf2)
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
778788 (uhrf2)
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
778788 (uhrf2)
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
778788 (uhrf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
TTD
PHD
ubiquitin
zf-C3HC4_3
Agenet
zf-C3HC4_2
Prok-RING_4
zf-RING_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
PHD_2
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
778788
NCBI-ProteinID:
NP_001071846
Ensembl:
ENSCING00000020404
UniProt:
Q4H2N4
LinkDB
All DBs
Position
11:complement(327833..330588)
Genome browser
AA seq
743 aa
AA seq
DB search
MWIRVRTMDGKRSEQVDGLSKLTKIEDLRELIMEKFSVEPSLQRLFFRGKQLEDGYSLFD
YDVGLNALVQLLERKVIKEVETQQENETPASPSDTDSGIETAENVQEVVEDTPSTSCEGL
YKINALIDAQDTDVGAWFEAKVVNVTKGKTDGLDYHIKFDDYGDDGVKVVGEKLIRPRAR
KLLEWNEIEVTSKVMANYNMDHPKERGFWYDCVVLDKKNKRKKNELTVQLLLGENRTLEP
CNITFVEEVFVIETVGSESGPLSADTAVTRKTEKEADCGHCRDNPDKDCKECGCHVCGEK
RAFDKTLLCDECNLPFHTFCLNPPLDNLPEEDDWYCPLCCQDRSKVVKAGEKLKENKKKN
KMKSMTSDTQRDWGKGMACVGRSKICTIVPSNHFGAIPGVPVGSLWKFRVQVSESGIHRP
HVSGIHGKENEGAYSIVLAGGYEDDEDNGDEFTYTGSGGRDLSGNKRTAEQSCDQVLTKN
NMAIARTCDVKADAKNGAEAKDWKKSRPIRVVRNYKGAKHSDYAPEEGNRYDGLYKVVKY
WPEKGKSGFIVWRYLFRRDDKEPAPWTKAGKKRSKELGITIKYPEGYLEAQAQKLANEEA
AGPKKKGKRSLSNDDASTPKSTPKKIKINEFEVSQELMKMIKTDKLNSKLWSEGLKSRKE
GQTKFYQIIQDLFMCVCCQDVVHQPITTPCKHNLCKTCLQRSFKADIYSCPVCREDLEKE
NIEINIPLQKVLLKLFPGYTSGR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcagggttcgaacaatggacggtaaaaggtctgagcaagttgatggcctttct
aaactaacgaaaatcgaagatttgcgagaacttataatggaaaagtttagcgtcgaacct
tcgcttcaacggttgttcttccgaggcaagcaactagaagatggctacagcttatttgat
tacgatgttgggttgaatgcacttgtacaattgttggaacggaaagttataaaagaggtg
gaaacgcagcaagaaaacgagactccagcgtcgccgtcagacaccgatagcgggatcgaa
accgctgagaatgtacaagaagtggtggaggatacaccttctacttcatgcgaaggtttg
tacaaaattaatgctttaattgacgcccaagacacagatgttggggcatggtttgaagcc
aaagttgtaaatgttactaaaggcaaaactgatgggttggattatcatattaagtttgat
gattatggggatgatggggttaaagttgtaggcgaaaagttaattagaccaagggcaaga
aagctgttggaatggaatgaaatagaggttacttctaaggtgatggctaattataatatg
gatcatcccaaggaaagaggtttttggtatgactgtgttgtgctagataagaagaataaa
agaaaaaagaacgaactaactgtgcagttattgttgggtgaaaatcgcactttagagcca
tgtaatataacttttgtagaagaggtatttgtaattgagactgtgggttcagaaagtgga
cctttgtctgctgatacagctgtgacaaggaaaactgaaaaagaggcagattgtggccac
tgtagagacaaccctgataaggattgtaaagaatgtggttgtcatgtatgtggagagaaa
cgggcatttgataagacactgctgtgtgatgaatgtaatcttccattccatacattctgt
ctgaatcctcctcttgataatttgccggaggaagatgactggtactgccctctatgttgc
caggatcgatctaaagtagttaaagctggggagaaactgaaagagaacaagaagaaaaac
aaaatgaagtccatgacctctgacacacagagggattggggaaaagggatggcttgcgtt
ggaaggtcaaagatttgcaccattgtgccttccaaccactttggtgccatccctggtgtc
cctgttggtagcttgtggaagtttcgtgttcaagtcagtgagtctgggattcatcgacca
catgtgtcaggtattcatggaaaggagaatgaaggagcttactctattgtgctcgccggg
ggatatgaggatgatgaagataatggagatgagttcacgtatactggaagcgggggtcgt
gacctttcggggaacaagagaacagcagagcagtcatgtgaccaagtgctgacgaaaaac
aacatggcgatcgcgcgaacatgtgacgtgaaagctgatgcgaaaaatggagcagaagct
aaagattggaagaagtcaagacctatcagggttgtgaggaattataagggagcaaaacat
agtgattatgctcctgaagaagggaatagatatgatgggctttataaggttgttaaatat
tggcctgagaagggaaagtctggtttcattgtgtggaggtatttgttcaggagagatgac
aaggaacctgcaccatggactaaagcggggaagaagagaagcaaggaacttggaattacg
ataaaatatccagagggttatcttgaagcacaggctcagaaactcgcgaatgaagaagca
gccggtccaaagaaaaaaggcaaaaggagcctcagcaatgatgatgctagtacccctaaa
agtactccaaagaaaatcaagattaacgagtttgaggtttcacaagagttgatgaaaatg
ataaaaactgacaaacttaactccaagttgtggagcgaggggttaaagtcaagaaaagaa
ggacaaaccaagttttatcaaatcatacaagatctgtttatgtgtgtgtgttgtcaggat
gtggttcaccaaccaattacaactccttgcaaacataatttatgtaagacgtgtctacaa
cgttcgttcaaagcagatatttattcgtgcccggtttgtagagaagatttggaaaaagaa
aatatagagattaacattccgctgcagaaagttcttcttaaacttttccctggatataca
agcggacgttag
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