Ciona intestinalis (yellow sea squirt): 778812
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Entry
778812 CDS
T01056
Symbol
zf(c2h2)-25
Name
(RefSeq) zinc finger protein
KO
K25209
zinc finger protein castor
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778812 (zf(c2h2)-25)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
778812 (zf(c2h2)-25)
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Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Motif
Other DBs
NCBI-GeneID:
778812
NCBI-ProteinID:
NP_001071867
UniProt:
Q4H2J0
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Position
1:8011498..8052867
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AA seq
756 aa
AA seq
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MYNYISQMVADKKPANFFQNYPRPGDAVNTGAFAMLQNSIIANIVSNQAARTSIATVPTP
NNIPIPSTAAFDGQSNQAKANSRFSEEGFLHVRPGMSCTRQDCKYLNQNHWHCTLNRCRY
VCKSLGKAQSHRQAHDSLEGYARSAKEWFRSYTVKKNCPNPNCEFRLRGHYHCLKPGCQF
VTIGTSKLPWHMKKHEKIARREASGFKYYTKKEQCAKFGCKYNGLFSHYHCIRADCEFAF
QYKHQMSTHVRKHLRRMLGRSYHGRDLHTNSTVADIDHSNVDSGDDSLPLIVDEADEIEQ
RPGDATERDEHDYGYKHQANPTTELTQQQLAVLDQISRGVKAAQMNQSDVGATEPSSPDL
NNSTFNDDDDDDTSSDEVLDLTAGASHLDMDSNSVGSSSNNEYGTDIGNTADDEGQHMMQ
TNEQIIPTTPVTSEFSAHKTPEPANSSAGSVFAKFRLNNDVMEGFKRFESSENCGDTMCT
YMFKVAHFHCIRDDCNYRFTGRTHMFKHHQHHERVAGLVRDDFKRIKTTQDCAFDGCPYK
GNSTHFHCLRCPFKCTDSAKVGTHRRQHVKADTLEQSGFERFRGKEDCMRENCKYRDRNT
SHFHCLQDGCSYTVVGLSGIEQHANKHKRNNILAQVCSTMSQETAYKPFINPNMGEMHSF
PTSHSRQETYAPVFVPPVVPFVQRSDAPSPVTDDHSSVSPAYSAVTAHFDPRYLQVQSAG
GGMELAGSLNLSVNQQDRGVASTASLSSVPAGVGSL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtacaattacatatcccagatggtcgcggacaaaaaacctgcgaattttttccaaaac
tacccccggcccggagacgcagttaacacaggggcctttgcaatgctgcaaaactcaatt
atcgctaacatagtgagcaaccaggcggccaggacaagcattgctactgtgcctacacct
aacaacataccgatccccagcacagcagcattcgacgggcaatctaaccaagcaaaagca
aactcgcgtttttcggaggagggatttctgcacgttagacctgggatgtcatgcacacga
caagactgcaagtatttaaaccagaaccactggcactgcaccttaaaccgttgtcgttat
gtatgcaagtccttaggaaaggcacaatcgcatcgacaagcccacgatagtttggaaggc
tacgcacggtctgcaaaggaatggtttcgcagctacacagtgaaaaagaactgtccgaac
ccgaactgcgaattccgacttcgtgggcattaccattgcttgaaacctggttgtcagttt
gtcactattgggacgtctaagcttccatggcacatgaagaaacatgaaaagattgcgagg
cgtgaagcgagcgggttcaagtattataccaagaaggagcagtgcgcgaaatttggctgc
aagtacaacggtctattcagtcactaccattgtatacgcgctgactgcgagtttgccttt
caatacaaacaccaaatgtcaacacacgtacgcaagcaccttaggcgtatgctaggtcgt
tcttaccacggacgagacctgcataccaacagtacagtggccgatatcgatcacagtaat
gtagattctggtgacgactctctgccgcttatagtggacgaagcggacgagatagagcag
cgaccaggtgacgctacagagcgcgatgagcatgattatgggtacaaacatcaagcgaat
ccaaccacagaacttacacagcaacaactggcagttttagaccaaatatcaagaggtgta
aaagctgctcaaatgaaccaatcggacgtgggcgctacagagccgagttctccagaccta
aacaacagtacattcaatgatgatgacgacgacgatacttccagcgatgaagttttagat
ttgaccgctggtgcgtcacaccttgatatggattcgaacagtgttggctctagctccaac
aacgaatacggcacagatattggaaacactgcggatgacgagggtcaacacatgatgcaa
actaatgaacaaatcattcctaccacccctgtaacatcagaattctcagcacacaaaacg
cccgaaccagcaaacagttccgctggttcagttttcgccaagtttcggttaaacaatgac
gtcatggaaggttttaaacggttcgaatcatctgaaaattgcggtgatacgatgtgtact
tatatgtttaaggtcgcccatttccactgtatacgagacgactgtaactaccgtttcact
ggtcgtacacacatgttcaaacaccaccagcaccatgaacgtgtggcggggctcgtacgt
gatgattttaaacgtataaagaccacacaggactgtgcattcgacggatgcccatacaaa
ggaaacagcacacattttcactgcttacgttgcccgttcaaatgtaccgacagtgcaaag
gtaggcacgcatagacgtcaacacgttaaagctgatacattagaacaatccggatttgaa
agattccgtggaaaagaagattgtatgagagagaactgcaaatatagggaccgaaacact
tcccacttccattgcttacaagatggatgctcatacactgtggttggtttatcaggaatt
gaacaacacgccaataaacacaaacgtaacaatatattggctcaagtatgctctactatg
agccaagaaactgcgtacaaaccgtttatcaacccaaacatgggcgaaatgcattcgttc
ccaacaagccattcccggcaggagacatacgcccctgtgtttgtcccgcctgttgtaccg
tttgtgcaacgctctgatgcccctagtcccgtgaccgatgaccactcaagcgtctcgcct
gcctactcggccgtgaccgctcatttcgacccgaggtatctgcaagtgcagtccgctggc
ggcggtatggagctagctgggtctctgaatctttctgtaaaccagcaggaccgaggcgtc
gcttcaaccgctagtctctctagcgtccccgccggtgttggttctttataa
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