Ciona intestinalis (yellow sea squirt): 778824
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Entry
778824 CDS
T01056
Symbol
zf(c2h2)-9
Name
(RefSeq) zinc finger protein
KO
K09220
IKAROS family zinc finger protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
778824 (zf(c2h2)-9)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778824 (zf(c2h2)-9)
Protein phosphatases and associated proteins [BR:
cin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
778824 (zf(c2h2)-9)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
778824 (zf(c2h2)-9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_11
zf-C2H2_jaz
GAGA
zf-Di19
zf-H2C2_5
Zn_SUZ12
zf-C2H2_AcuF
PGA2
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
778824
NCBI-ProteinID:
NP_001071878
Ensembl:
ENSCING00000006863
UniProt:
Q4H2G8
LinkDB
All DBs
Position
9:368553..382438
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AA seq
610 aa
AA seq
DB search
MMPAASMEVTLSQHTSSQHTSPQPSPNSSWMEKQASDVTTQNADDVIDRSVASSTSSPSR
PDSGMAIVLSEKDDSVTSPRQNAETPAVLPAAFKSSSPSQSSADSGIVSSSGQDESPTSS
SSLTTSSSRKDASNNDSSINKAQAQRNLNLIACEECGLICAGQSHYQVHIRSHTGERPFK
CTVCGVAFTQKGNLRRHYKIHSEEKPFQCPVCSYRCRRRDALNGHMRIHSDIRPYRCVYC
ARSYKSRQSLKEHEYQCVYKNDPIVQARQLTSSPAKGSFGDKRLSPLTTSQTSSSPISMT
SSNLPIMQSQVLNPLLTSSSPNSTSSGKRKASNPQKFTRLSDHQQQVIPSLANALQYMPT
LLTTMMQQHMNDTATAEQQRQQDEALDFSAKRKSGLQNTNGDTDSYQDNVLRHPRATTER
LSGSARRKRPKYLNEKIEQNMQGHESSFPSKYDVSPTMNSLDLSGQSKNDDMTSFKSDVR
STSPFAHVRSGDASRSGLRVFSSLGDDSEIEELKTYICSHCRCIFLDHVMFAIHVGCHGF
RDPLECNVCGHLAADRYQFQSHLARGEHNLGGKVNDVTGEKSDYVTDDITNETSTYQQSS
TYVTKSAAFR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgatgccagctgccagtatggaagttacactctcccaacatacgtcatcacaacatacg
tcaccgcaaccatcgcccaattcttcatggatggaaaaacaagctagtgacgtcacaaca
caaaacgccgatgacgtcattgatcgaagcgtcgcgtcaagtacgtcatcaccctcgcgt
ccagattcgggaatggcgattgtcctcagcgagaaagacgacagtgtgacgtcaccaaga
caaaatgccgaaactccagcagtgttgccagcagcttttaaatcaagtagcccttcacag
tcatctgccgattctggtatcgtgtcgtcatcaggacaagacgaaagccctacgtcatca
tcttccttaacgacgtcatcatctcgaaaagatgcatcgaacaacgacagcagtatcaac
aaagctcaagcacaaaggaacctgaaccttatagcttgtgaagaatgtggtctcatatgc
gctggccaaagtcattaccaagttcacattagatcccacaccggagaacgcccatttaaa
tgcactgtatgcggagttgcgtttacacagaagggaaatctgaggcgacattataagatc
cactctgaagagaagccgtttcaatgccccgtgtgttcgtacagatgcagacggcgagat
gcattgaatggacatatgagaatacattcagatattcgaccgtatagatgtgtttactgt
gcacgtagttacaaatccaggcaatctctcaaggagcacgaatatcaatgcgtttacaag
aacgaccctattgtacaagctcgacagctgacgtcatcaccagcaaaaggaagtttcggt
gacaagcgtttgtctccacttactacgtcacaaacctcaagctcccctatatctatgacg
tcatcaaacctccccattatgcaatcacaagttttgaacccgctcttgacgtcatcgagt
ccaaactccactagcagcgggaaacggaaggcgtcgaacccgcagaagttcactcgactc
tccgatcaccaacaacaggttatcccttcgttggccaatgctttgcaatacatgcccacc
ttgttaactacgatgatgcagcaacacatgaacgacacggcaactgccgagcaacaaaga
caacaagacgaagcgctcgatttctctgcgaagcgaaaaagcggtttgcagaatacgaac
ggagatacggatagttaccaggacaacgtgttacgtcatccccgcgctacaacagagagg
ctttcgggcagcgcgagaaggaaacgaccaaaatatttgaacgagaagattgaacaaaac
atgcagggacatgagtcttcctttccctcgaaatatgacgtcagtcctacgatgaactct
cttgacctctccgggcaaagcaaaaacgacgatatgacgtcattcaagagtgacgtcaga
agcacatcaccgttcgcgcacgtcagatccggtgacgcatcacgcagcggactccgtgtc
ttctcttccttaggagatgatagcgaaattgaagaattgaagacttacatctgctcacat
tgtcgatgcatcttcctggatcacgtgatgttcgccatccatgtcggttgccatggtttc
agggacccactcgagtgtaacgtatgtggccacctagcggccgaccgttaccagttccag
tcccatctcgcaagaggagagcacaatctgggtggaaaggttaatgacgtcactggagag
aaatctgactacgtcactgatgacatcacaaacgaaacctctacttatcaacaatcgagc
acttacgtaacgaagtctgccgcttttagataa
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integrated database retrieval system