KEGG   Ciona intestinalis (yellow sea squirt): 778825
Entry
778825            CDS       T01056                                 
Symbol
zf(c3h)
Name
(RefSeq) zinc finger protein
  KO
K18753  butyrate response factor
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cin03019]
    778825 (zf(c3h))
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     778825 (zf(c3h))
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_4 Tis11B_N zf-CCCH_2 zf-CCCH_9 Zn_finger_prot zf-CCCH_UNK-like_4th
Other DBs
NCBI-GeneID: 778825
NCBI-ProteinID: NP_001071879
Ensembl: ENSCING00000014446
UniProt: Q4H2G7
LinkDB
Position
4:111299..113675
AA seq 380 aa
MSSTMISSFSDFSENLHKDFWESAIIRTTMDYSVLKSGFDKIDMSVSQKVIAANLTSRPV
LTRRHSSSMFCSASTNNAPLTGYNENALLASHASLETVNEEKFRSRAFSEGSSVLSQESM
QDQQQSATSRYKTELCRPFEENGKCKYGDKCQFAHGKHELRRMVRHPKYKTELCRTYHTS
GFCPYGPRCHFIHNQEDVGIAKKQTQPTRIQSQTSVPVKINNRQLSQHQRPRDLQLFTQS
ASFGHMPPYSPSNSSPSIHNTQPMFGLSEVLSPISPMPQNSTGGQFFSYCGKGSNSPVES
NRRSSFSDNRQSTPPITQLDIFNRSQQPTEFPTIDTSDDLVFDTPPTPPDSDRESATGSP
KNYEQMGQRLPIFRCLSKTE
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgtcttcaactatgatctcaagcttttctgattttagcgagaacttacataaagacttt
tgggagtcagcgattattcgtactacaatggactactcagtattaaaaagtggatttgac
aagattgacatgagtgtgtcccaaaaagtgatcgctgctaatttgactagtcgacctgtc
cttacacgccgccactcttcatctatgttttgttcagcgtccacaaataacgcaccgctg
acaggatacaacgagaatgctctgcttgcttcgcacgcttcactagagacggtgaatgaa
gaaaaattccgtagcagagcttttagcgaaggctcgtctgtactaagccaagaatcaatg
caagaccaacaacagtccgccacgagccgttataaaaccgaattgtgtcggccgttcgag
gaaaacggaaaatgcaaatacggcgacaaatgccagtttgctcacggcaaacacgagtta
cgtagaatggttcgacacccgaaatacaaaacggaactttgtcgtacgtatcacaccagt
ggtttttgtccatacggaccacggtgccattttatccacaaccaagaggacgttggcatt
gctaaaaaacaaactcaacctacaagaatacaatcgcaaacgtcagtcccggtaaagatt
aataatcgccaattatctcagcatcaaagaccacgtgatcttcaactctttacacaaagc
gcatcgttcggccacatgccaccttactcgccatccaacagcagcccaagtattcacaac
acgcaacccatgtttggattaagtgaagtcttatctccaatttcacccatgccacaaaat
agtacaggcggtcagttctttagttattgtggtaaagggagtaattctccggtggaatcg
aaccgacgtagcagtttctccgacaaccgtcaatccacgccaccgatcacacaactcgat
atctttaatcgaagtcaacaaccaactgagtttccgaccatcgacacaagcgatgatctc
gtatttgatacgcccccaacaccaccggattccgaccgagaatcggcaactggatcacct
aaaaactatgagcaaatgggccaaaggttaccaatcttccgatgcctgtctaaaaccgag
tga

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