KEGG   Ciona intestinalis (yellow sea squirt): 778861
Entry
778861            CDS       T01056                                 
Symbol
zf(matrin)-2
Name
(RefSeq) zinc finger protein
  KO
K12826  splicing factor 3A subunit 2
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    778861 (zf(matrin)-2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cin03041]
    778861 (zf(matrin)-2)
Spliceosome [BR:cin03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    778861 (zf(matrin)-2)
 Complex B
    778861 (zf(matrin)-2)
 Complex C
   U2 SnRNP specific factors
    778861 (zf(matrin)-2)
SSDB
Motif
Pfam: SF3A2 zf-met CactinC_cactus
Other DBs
NCBI-GeneID: 778861
NCBI-ProteinID: NP_001071907
Ensembl: ENSCING00000003319
UniProt: Q1RPZ2
LinkDB
Position
8
AA seq 349 aa
MDFQNRAGGKTGSGGVASLSDANRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCL
TLHNNEGSYLAHTQGKKHQSNLAKRAARDAKEAPIQPAPVKPMVEVKKFVKIGRPGYKVT
KQRVPETGQQSLLFQVDYPEIVETIQPRHRFMSAYEQHIEPPDRSWQYLLFAAEPYETVA
FKVPSREIDKGESKFWTYWNKDTKQFFLQFHYKIEMRPPPMMSNPRDRMDDEENNLLPPG
TLPPPPQMDNDDMNFDHPPNFHDRMPFNPMGPPPPQNGPGGHMPPPFNFRGPPPMGGPPM
MGQRPPMGPPMMGGPRMGHPDGFMDQGPRGPAPPPPPMAPPPDSDDPEN
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggatttccaaaacagagctggtggaaagactggctctggaggagttgcttctttatct
gatgctaatcgtgatagaagggaaaggttgaggcaacttgcacttgaaactattgattta
aataaggatccttattttatgaaaaatcatcttggttcatatgaatgcaagttatgtttg
acgcttcacaataatgagggtagttacttggctcacacccaaggaaagaaacatcaatcc
aacctcgcaaagagagcagcaagagatgcaaaggaagctcccatccaacctgctcctgtt
aaaccaatggtggaagtgaagaagtttgtaaagattggaagacctggttataaagtcaca
aagcaaagagtcccagaaaccggtcaacaaagtttattgtttcaagttgattatccggag
attgttgaaacaattcagcctcgacacaggtttatgtcagcatatgaacaacacattgaa
ccacctgatagaagttggcaatatcttctctttgctgctgaaccttatgaaactgttgct
tttaaggtgccaagcagggagatagacaagggcgagagtaaattctggacttactggaac
aaagatacaaaacagtttttcctccagtttcattataagattgaaatgagacctcctccc
atgatgtcaaacccccgggatcgaatggatgatgaagaaaataatcttcttcctccagga
acgcttcccccacctccacagatggataacgatgacatgaactttgatcaccctccaaat
ttccacgaccgaatgccttttaaccctatgggacctccacccccgcagaatgggcctggg
ggtcatatgcccccaccttttaatttcagaggcccgccacccatgggtgggcccccaatg
atggggcaaaggccccctatgggacctcctatgatgggaggtccacgtatgggtcaccct
gatgggtttatggatcaagggccccggggtcctgccccaccccctccgccaatggccccg
cctccagattcagatgaccctgaaaactag

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