Ciona intestinalis (yellow sea squirt): 778877
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Entry
778877 CDS
T01056
Symbol
zf(fyve)-1
Name
(RefSeq) zinc finger protein
KO
K23532
WD repeat and FYVE domain-containing protein 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
778877 (zf(fyve)-1)
Membrane trafficking [BR:
cin04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
778877 (zf(fyve)-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_SPT8
EIF3I
FYVE
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
WD_LRWD1
RMC1_N
Beta-prop_RSE1_2nd
Beta-prop_BBS7
Nucleoporin_N
NBCH_WD40
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Zn_ribbon_IFT122
Beta-prop_IFT122_2nd
FYVE_2
Motif
Other DBs
NCBI-GeneID:
778877
NCBI-ProteinID:
NP_001071921
Ensembl:
ENSCING00000017405
UniProt:
Q1RPW9
LinkDB
All DBs
AA seq
402 aa
AA seq
DB search
MAAEIMTKPQQRQPILLSRIEDDTQDVVTMAVFTPNEEGIITVSIDKSIRIWLKRETGQY
WPSVCHFIESPCTTMFYSEEPRLMFVGQDNGNVDEFKVSEDYNQITHQRKYLAHQKQVTG
CIFTHQNEVLVVCGKDKYITWHWTKNGQRFGGYQTPSQPMCLQYDHQSHYVFAGLSNGEI
TVLKINKNESQLITQLKGHSGSIACLCWDPTHQILYSGSSDKSIIMWDIGSNKGTAIELQ
GHTSKVTSLLYASHTQQLLSTGLDGMLVVWNMEIKRNETPVWQEGNQCIKCKQPFFWNFK
QMWSDKTVGLRQHHCRKCGIAVCASCSSKRTTIPLYGFEFEVRVCEECYESVTEEQKAPT
ATFHDLKQSVIMLYPDWSKCRFVTSGNDRTIKLWDLKNIVTK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaaatcatgactaagccccaacagaggcaaccaatattgctgagtcgtatc
gaagacgacacgcaggatgttgttacgatggccgtgttcacgccaaacgaggaaggaatt
ataactgtcagcattgataagtcaattcgtatttggttaaaaagggaaaccggacaatac
tggccaagcgtttgtcattttattgaatcaccttgcactaccatgttttactcagaagaa
ccaaggttgatgttcgtgggacaagataatgggaatgttgatgaatttaaagtttcagaa
gattacaaccaaatcacacatcagagaaaataccttgcccaccagaaacaagtcaccggc
tgcatcttcacgcaccagaacgaggtcttggttgtttgtggtaaagataaatacattacg
tggcattggaccaagaatggacaaaggtttggaggttaccaaacaccatcccaacctatg
tgtttacaatatgatcaccagtcacattatgtgttcgctggtttatcaaatggtgaaatt
actgtgttgaagataaataagaatgagagtcaactaataacacaattgaaaggacattct
ggttcaattgcttgtttatgttgggatcctacacaccaaattctttactctggatcttca
gacaagtccattataatgtgggatatcgggagcaataaaggaaccgctattgaactacaa
gggcatacgagcaaagtcacttctctcctttacgcaagccacacacaacaactattgtcc
acagggttggatgggatgttggtggtctggaacatggagatcaaaaggaatgagactcca
gtatggcaggagggcaaccaatgcattaaatgtaaacaacctttcttttggaactttaaa
caaatgtggagcgataagacggttggtttaaggcaacatcattgcaggaaatgtggaata
gcagtttgtgcgagttgtagcagtaaacgaaccactattcctttgtacgggttcgagttt
gaggttcgtgtgtgcgaggagtgttacgaatccgttactgaggaacaaaaagccccaact
gctacatttcatgatttaaaacaaagcgttataatgctctatcctgattggtcgaaatgt
agattcgtaaccagcggcaacgaccgtacaataaagctgtgggaccttaagaacattgtc
accaagtga
DBGET
integrated database retrieval system