KEGG   Ciona intestinalis (yellow sea squirt): 778877
Entry
778877            CDS       T01056                                 
Symbol
zf(fyve)-1
Name
(RefSeq) zinc finger protein
  KO
K23532  WD repeat and FYVE domain-containing protein 2
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    778877 (zf(fyve)-1)
Membrane trafficking [BR:cin04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    778877 (zf(fyve)-1)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 Beta-prop_SPT8 EIF3I FYVE Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_RFWD3 ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_IP5PC_F WD_LRWD1 RMC1_N Beta-prop_RSE1_2nd Beta-prop_BBS7 Nucleoporin_N NBCH_WD40 PEP5_VPS11_N WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 Zn_ribbon_IFT122 Beta-prop_IFT122_2nd FYVE_2
Other DBs
NCBI-GeneID: 778877
NCBI-ProteinID: NP_001071921
Ensembl: ENSCING00000017405
UniProt: Q1RPW9
LinkDB
AA seq 402 aa
MAAEIMTKPQQRQPILLSRIEDDTQDVVTMAVFTPNEEGIITVSIDKSIRIWLKRETGQY
WPSVCHFIESPCTTMFYSEEPRLMFVGQDNGNVDEFKVSEDYNQITHQRKYLAHQKQVTG
CIFTHQNEVLVVCGKDKYITWHWTKNGQRFGGYQTPSQPMCLQYDHQSHYVFAGLSNGEI
TVLKINKNESQLITQLKGHSGSIACLCWDPTHQILYSGSSDKSIIMWDIGSNKGTAIELQ
GHTSKVTSLLYASHTQQLLSTGLDGMLVVWNMEIKRNETPVWQEGNQCIKCKQPFFWNFK
QMWSDKTVGLRQHHCRKCGIAVCASCSSKRTTIPLYGFEFEVRVCEECYESVTEEQKAPT
ATFHDLKQSVIMLYPDWSKCRFVTSGNDRTIKLWDLKNIVTK
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggcggccgaaatcatgactaagccccaacagaggcaaccaatattgctgagtcgtatc
gaagacgacacgcaggatgttgttacgatggccgtgttcacgccaaacgaggaaggaatt
ataactgtcagcattgataagtcaattcgtatttggttaaaaagggaaaccggacaatac
tggccaagcgtttgtcattttattgaatcaccttgcactaccatgttttactcagaagaa
ccaaggttgatgttcgtgggacaagataatgggaatgttgatgaatttaaagtttcagaa
gattacaaccaaatcacacatcagagaaaataccttgcccaccagaaacaagtcaccggc
tgcatcttcacgcaccagaacgaggtcttggttgtttgtggtaaagataaatacattacg
tggcattggaccaagaatggacaaaggtttggaggttaccaaacaccatcccaacctatg
tgtttacaatatgatcaccagtcacattatgtgttcgctggtttatcaaatggtgaaatt
actgtgttgaagataaataagaatgagagtcaactaataacacaattgaaaggacattct
ggttcaattgcttgtttatgttgggatcctacacaccaaattctttactctggatcttca
gacaagtccattataatgtgggatatcgggagcaataaaggaaccgctattgaactacaa
gggcatacgagcaaagtcacttctctcctttacgcaagccacacacaacaactattgtcc
acagggttggatgggatgttggtggtctggaacatggagatcaaaaggaatgagactcca
gtatggcaggagggcaaccaatgcattaaatgtaaacaacctttcttttggaactttaaa
caaatgtggagcgataagacggttggtttaaggcaacatcattgcaggaaatgtggaata
gcagtttgtgcgagttgtagcagtaaacgaaccactattcctttgtacgggttcgagttt
gaggttcgtgtgtgcgaggagtgttacgaatccgttactgaggaacaaaaagccccaact
gctacatttcatgatttaaaacaaagcgttataatgctctatcctgattggtcgaaatgt
agattcgtaaccagcggcaacgaccgtacaataaagctgtgggaccttaagaacattgtc
accaagtga

DBGET integrated database retrieval system