Ciona intestinalis (yellow sea squirt): 778892 Help Entry 778892            CDS       T01056                                  Symbol zf(ring)-30 Name (RefSeq) zinc finger protein   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     778892 (zf(ring)-30)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:cin04121]     778892 (zf(ring)-30) Enzymes [BR:cin01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      778892 (zf(ring)-30) Ubiquitin system [BR:cin04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     778892 (zf(ring)-30)   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      778892 (zf(ring)-30) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd zf-C3HC4_2 Beta-prop_TEP1_C EIF3I Beta-prop_WDR19_1st zf-C3HC4 ANAPC4_WD40 zf-RING_UBOX Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 zf-RING_2 zf-C3HC4_3 zf-RING_5 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N WD40_like zf-C3HC4_4 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_Vps41 RING_XB3-XBAT31 zf-RING_10 WD_LRWD1 TRAF3_RING Osmo_CC Sina_RING Motif Other DBs NCBI-GeneID:  778892 NCBI-ProteinID:  NP_001071934 Ensembl:  ENSCING00000006174 UniProt:  Q1RPU5 LinkDB All DBs AA seq 645 aa AA seqDB search MKRSSSGSSIKPTVPENATPLQPTVLGSYREMNSDFICPICFNLIEEAYMTKCGHTFCYN CLKKSLEQSNKCTKCNSALSKTDEIYPNYLLNNLIQKKKKKMDEMLACSKRMKIDSRLWE WQSLLATEDDDIHLADIDQMLKLLQEKRRRLVQESAVAHNQVLLEFLFELKKQKQTALER ARTELSVVETDISRVEEALERGVDKTLLDSVVPDDNDENIKKEQLVPKPHSSEPSTSSAA GSSSETSIETFNQLSQKSKDEESSLHRTVAKRRCRLHAHFDDLHECYYNTRLCEIAPVEE RNVELLGDFSNKLRRFTQFSSIRAVASLSYASDILNQSSIVSSIDFDKDCDHFAVAGVTK KIKVYDYESVVNNVIDGVNCPIVQMACNSKISSISWSHYHKSWLASSDYEGSVILWDAFT GQKNKVFQEHEKRCWSVDFNSVDPRLLASGSDDARVKLWSTGVQRSVACIEAKANVCCVQ FNPHSAFHLAFGCADHFVHYYDIRNTKQSVSVFRGHKKAVSYAKFVDKDEIVSASTDSEL RLWKTSTSPCVRSFRGHTNDKNFVGLATNGDYIACGSENNSLYIYYKGLSKSLLTYKFNV VKSVLDREQTDDDSNEFVSAVAWRANSDIIAAANSQGTIKILELI NT seq 1938 nt NT seq  +upstreamnt  +downstreamnt atgaaacgttcttcaagtggcagttcaataaaaccaaccgtgccagaaaatgccaccccg ttacaaccaacagtgcttggttcttatagggaaatgaacagcgactttatttgtccaatt tgcttcaatttaatagaggaagcatatatgaccaagtgcggacacactttttgctacaat tgccttaagaagagcctagaacaaagcaacaaatgtacaaaatgtaactcagctctgagc aaaacagatgaaatctaccctaattatcttcttaataatctgattcaaaagaagaagaaa aaaatggatgagatgcttgcttgttcaaagcgcatgaaaatagacagtcgcttatgggag tggcagtcattactggccactgaggatgatgacattcaccttgctgatattgatcaaatg cttaaactgctgcaggaaaaacgacggcgtttggtgcaagaaagtgcagtggcacataat caagttctgcttgaatttctttttgaattaaagaaacagaagcaaactgctttagaaaga gcaagaaccgaactctctgttgttgagactgatattagtcgagtagaggaagcattggaa agaggtgtggataaaacattgttggattcggttgtaccagatgataatgatgaaaatatc aaaaaagaacagttggttccgaaacctcattcctcagaaccttcaacatcatcagctgca ggttcttcatctgaaacgagcatcgaaacatttaatcaactgtcacagaaaagcaaagat gaagaaagttcattgcatcggaccgtggcaaagagaagatgcagattacatgctcacttt gatgatctgcatgaatgttattacaacactcgactttgtgaaattgctcctgtggaagaa aggaatgtagaacttctgggtgattttagcaacaagcttcgaagattcacgcaattttca tcgattcgtgcggtggcttcgcttagttatgccagcgatattttgaaccagtccagcatt gtttcaagcattgacttcgataaagattgtgatcattttgctgttgcaggtgtcaccaag aaaattaaagtctacgattatgaatctgtggttaacaacgtcattgatggcgttaattgt ccgattgtgcaaatggcatgcaactcaaaaatttcttctatcagttggagccactaccat aagtcatggttggcgagcagtgattatgaaggttctgtgatcttgtgggatgcctttaca ggtcagaaaaacaaagtgtttcaggagcatgagaagcgatgttggagcgtagactttaac agtgttgatccaaggttgctcgcttctggttcagatgatgctagggtaaaactatggtct actggggttcaacggtctgttgcttgcattgaggcaaaagcaaatgtatgttgcgttcaa ttcaacccacacagtgcatttcatttggcatttggctgtgctgaccattttgtccattac tatgatattcgaaacacaaagcaatctgtgtctgtttttcgcggacacaagaaggctgtt tcgtacgcaaagtttgtggataaagatgaaattgtgtctgcctcaaccgacagcgagctt cgcttgtggaaaacttcaacctctccttgtgttcgatccttccgtggacataccaacgac aaaaactttgttggacttgcaaccaacggcgactacattgcttgtggtagcgaaaacaac tccttgtatatttactacaaaggattatctaagtctttgttaacatacaaattcaatgtt gtgaaaagtgttcttgaccgagaacaaacagatgatgacagcaatgagtttgtgagtgca gttgcgtggagggctaacagtgacatcattgcagctgccaatagtcaaggaacaataaaa atattagaactaatataa

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