Ciona intestinalis (yellow sea squirt): 778909
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Entry
778909 CDS
T01056
Name
(RefSeq) adenomatous polyposis coli protein isoform X1
KO
K02085
adenomatosis polyposis coli protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
778909
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
778909
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
778909
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
778909
Protein phosphatases and associated proteins [BR:
cin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
778909
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
778909
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
778909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APC_N_CC
Arm
SAMP
APC_r
Suppressor_APC
HALZ
Sec7-like_HUS
DNA_alkylation
Motif
Other DBs
NCBI-GeneID:
778909
NCBI-ProteinID:
XP_018668496
LinkDB
All DBs
Position
8:complement(4946067..4973144)
Genome browser
AA seq
2766 aa
AA seq
DB search
MLVVPDSPQIVDIMPTRTTSNENFVSNVNGNLPKHEDTLGVNEEIQESNRNGETNKELSR
YDQLLQQVECLKLENTTLKKELSNNSSQISKLESEALNLKEMVVMLGNSIKPPTEASEPN
DPRATGFVNPPNRPTALFPPHVYSPDMYYRYPMPNHHMLDVGHTPLSPSPSSTIAVEIRR
HLSNLHLQRTALLESLKREELAKDGYMRQLNDLSEQLKIMHDTDKPFSPTSEKTRLQLEA
GIREIQDQMEKNLGSPEMMSHRVQEWCMQIDRIELEIKKLHNHLMLLDRPIRSPLTAGES
MLHYRRIKHDTSSQTVQVNCTFDTLNDDQLSNDHPVVTENRLQQSRCTQTLKTVRSSLNG
CLGSVSSLSDHLVGAGSSDLLSVQHPVANDDTASMYSFTSSLPRQLAGNVSGSKTGEVCS
LLGSHDRHDMSCTFQRLSQSEDSCIVMRQDGYLPSMLRLLHDGSILPGGANPTPEEVKLR
LEIRSKTSQALTNIVSSNTDGDQKRIESHVLRHLEMIRRVSEDLFESLVEKNHTGASSES
AESPTRHPVAETLKNAESIIHSLREIMELVNYKVQRLAINELGGLFCVAEILILHCSSKH
DEEAQEETGSRLRQYSGRILTNLTYADNLNKVLLMNMRGLLETVRDQLQHESEEIQQAMA
SILRNLSWQADKEGRDLLRQKGVVRTLTECVICAKGEGTLKAMLSALWNLSGHCPANRED
ICSVEGSLAFLVSTLTYRSPSKSAMVIESGGGILRNISSIVATNETFRQILREHNCLQTL
LQQLTSASLTIVSNACGTLWNLSARDETDQQTLRELGAVNKLQKLIHSKHTVIAQGSAAA
LRNLLANRGDRLNTVFQNETKGDMPTLQTRKLRQLEADIQLASKNAPEISENFSPRHHAH
ITTNQNSMARLSLQEPGFVQKSGVNSHLSPGIHYSGSLGNLPQQTYSPSPGLPFRAWEDS
GSKNMLRAPTSNSGVFQNHPLSSHLQFNNNISRATSFADQNQNPFSNSLPSSRTKSGNLY
GKLPQCDFKAAKTWGHYHSVNNNSNNTELWNPNQSGNGNPEKMLSPSRMPDDLEEKLRHM
NDDYGMDQDDLPVNYSLQFTDEQSQTPGIQSPRTEEIYEKSATRMPKKSSAIATKPEVPG
KSMGNAVVGNKALKIAPRRHKPPAKVDFSVEQRILYADEESFDAEETPTNFGAIYREEQE
DPLFRDAGDENAINQDQPKEYKVEDTPACFTPRSAISDLPCEEEDDQNIHGDQNAQKKNE
QAYHNNVEDDKVDLQPGAMTPAFSTRGRKSGTMTPKGYQETPMMFSRCSSMCSLSSFEAP
SVQSQVESEPSRFCSGVISPSELPDSPGQSMPVSRSRSYSNLNDVLKDPSYISKPLPNAQ
PNVSNSEQKEEKKPQILQQLSRASEHVRAGYVTSLPQNDEIKCYNSEPAMSDMTAFSGLS
IGGDKVAPLGILKTSTDSSHPELEKAGNRFVTQAGYITSLPTADEIKNYGCEGTLSPMTS
LSEISVLRDHNEGFVKSTSGASPLKSRTGSHKSTSRSSNIAHLASLPESSRSSGTHASTS
SGSKSDHALPVTDENDHLDRIDDLGDVDDLSDSGSLGSLSDGEDLLQACIQSAIPKKSSS
RSSSTKPSSRGKDKSMGRKANTSKHPVKPAPKKEEPISKQSPLSPPAQVRPVRKFDIDSS
LAAAENKLQGMPILQYIEKKISEAPGLSDEDKETHAHPTTSNPSKSDTLDASDMTLTSQD
ITLNQSALDASDAARRSKTCREVIKTVETLNESYSVKKQLKVFEKQRTDVTTPTTSQSPC
NVASRLVPFPSMSNNVKVQAFLQSRPNTFMTEGTPVEMSCSTSLSNITIESGSDNYDFAQ
LQKQMVEQHREPPQEMKYSTTTQSDKPTIQSNNKSEQNNTDLFQHAEVPNNPTCSSSQEI
LNNLNKQIESLTIQNTETCTSGTGYVTSLPHSDEIKQFKTEGSVGAYTIFSALTIDSETK
IVPKGPEALPGRTNDESPPKRSPTQSKIPVRTPPPVLKEEKSRKSSESSLEAKEEAASAS
QHYGEDLINVVKDNPLNFGVEDTPFHLSGNNSSLSSIEIDSDGEGNDLLNACISSAIPSA
TYNMNPPPEPMHSHYNENHHRPSTLQADSTYQSNAIWVEMNKGIPQGQHLLNAISPLSLV
SLTSPDPTSNSFSITSAGTGTQTNEDYYRLSRQPSVGDSIGSEISIGSLVLGGDAKSLVK
TQNAGRPKISKGKDVERVSSDDKPPVVKGGKKIYRSPITGKPRENLRYPNKHKDNTSTGS
SSARIREHPRNNRNSGRSKSPCNKCHPPHQSRQLPISSSMGKLAETSPGRSHRKTNASST
YSKQMQPTCGGNPHGKPSRSRSAHAGYQSSVTQIYPPLKHVNSIMLNGVASMAARGDLVV
QQLEGKTAQVVPASTLANQFQHVSRPVLIKQGTFIQDEPSQALLQSMSRKPEVPKKPAKS
PPKAVKSKKQSEPQQKSKTLWKGLKKLLSPSDEAKNIVPSPTRKTPKKPQVTTRGKVVQN
QSDRVIESEDSSTGFNSGTWTKSKTGSTSSSLQSKQVRRTPERPHRTPSNAGSQSSSLSL
SSSSASNGSSSSVDVYQQPSTRMNIYPTARNMSPGAHVPKSPSAKSRIIVNSKSPADKTN
QGWRRTGDSRIHSRKISMESSSSATSAAGNRASGRKHGSQASIATSSDKRSVSVASGQSP
SARLFYEVVENPSRRNPGEGALPFPSPVRRVVQEVAPFNYRPYRIGESEEEEPNHKLDLT
RKQTTV
NT seq
8301 nt
NT seq
+upstream
nt +downstream
nt
atgttggttgtccccgattcaccacaaatagttgatataatgcccacaagaacaactagc
aacgaaaactttgtttccaatgtgaatggaaacttacctaaacatgaagacaccttaggt
gtcaatgaagaaattcaagaatctaaccgcaatggcgaaactaataaagagttatctcgg
tatgatcagttgttgcagcaagtagaatgccttaagcttgaaaacacaactttaaagaag
gaattatccaacaactcttctcaaattagcaaactggaatctgaggcattaaatctaaag
gaaatggtggtgatgctaggcaactccattaagccaccaactgaagcatcagaacccaat
gatccccgtgctactggttttgtaaatcctccaaaccgacctacagcactcttcccaccc
catgtgtactcgccggatatgtattaccgttaccccatgcctaaccatcatatgttggat
gttggacacacccctctcagtccttctccatcatcaactattgctgttgagattaggaga
catttaagcaacctgcatctgcagaggacagcacttctggaatcactgaagcgtgaagag
ctggcaaaggatggttatatgaggcaactgaatgatctcagtgaacagttaaaaataatg
catgatactgataaaccattttcccccacaagcgagaagacccgtcttcagctggaggca
gggatcagagagatccaggatcaaatggagaagaatctcgggagtccagagatgatgtca
catcgagtgcaggagtggtgtatgcaaattgatcgaattgaacttgaaataaagaagtta
cacaaccatcttatgttgttggatcgaccaatcagatctccccttacagctggagaatca
atgctgcattacagaaggataaaacatgacacatcctcacaaacggtccaagttaattgt
acttttgacacgttaaatgatgatcagttgtccaatgatcatccagttgtaaccgaaaat
cgccttcaacagtcaagatgcactcagaccctaaaaacagttcgttcctcgttgaatgga
tgtctcggatcagtttcttcgctttccgaccacttggtgggagcagggagcagcgatctt
ctgtcagtgcaacaccctgttgctaatgacgacacggctagcatgtacagttttacttct
tcgttaccacgacaacttgctggcaacgtgtcagggtctaagactggtgaagtttgctct
ctacttggctcgcacgaccgacacgacatgagttgcaccttccaacgtctcagccaatca
gaggatagctgtatcgtgatgaggcaagatggttatcttccctccatgctccgtcttctt
catgatggatcaattcttccaggaggagctaacccaactccggaggaggtgaagctgaga
cttgagatcagatctaaaacatcccaagcactaactaatatagtgagttccaacacggac
ggtgatcagaaacggatcgaatctcacgttcttcgtcacctggagatgatccgacgcgtc
agcgaagatctgttcgagagtctcgtcgaaaaaaatcatacaggagcgtcttcagaaagt
gctgagtcacccactagacacccagtggctgaaacattaaaaaacgccgagtcaatcatt
cattcgttgagagaaattatggagctggtcaattataaagtgcagagattagcaatcaac
gagcttggaggactattctgcgttgctgagattttgattcttcattgctcctccaagcat
gatgaggaggcacaggaagagactggatcacgtctccgtcaatattcaggacgcatcctc
actaatctaacgtatgctgacaacttgaacaaggttcttctcatgaatatgcggggattg
cttgaaactgtgcgagaccaacttcaacatgaatccgaagaaattcaacaagccatggcc
agtatattgcgcaatctatcttggcaagccgataaggaaggtcgtgacctgctgaggcag
aaaggcgtggttcgaactttaactgagtgtgtgatatgcgcaaaaggagaaggaacgctc
aaagcaatgcttagtgctctatggaatctatcaggacactgtcccgctaatagagaggat
atttgctctgtagagggctcattagctttcctggtatctactctaacctatcgtagccct
tccaaatccgcaatggtcattgagagcggtgggggaatacttagaaacatttcaagcatt
gtagcaaccaatgagactttcagacagattttgcgagaacacaactgcctacaaaccctc
ctccaacagcttacctcagctagtttaaccattgtaagcaatgcttgtggaacactgtgg
aatctttctgctagagatgagacggaccagcagacactgcgtgaacttggtgcagtgaat
aaactacaaaagttgattcactccaagcatacagtgatagctcaaggaagtgctgcagct
ttgagaaacttgcttgctaatcgtggggatcggctgaacacagtgtttcaaaatgaaacc
aaaggagatatgcctacactacaaactcgcaaacttcgccagcttgaagcagacattcaa
cttgcatcaaaaaatgccccagaaatatctgaaaatttctcccctcgtcaccacgcgcat
ataaccaccaaccaaaactcaatggctcgcctcagtctgcaggaacctgggtttgtgcaa
aagtctggagtaaactcccatctatcacctggcattcattactccggaagtctcggcaat
cttcctcagcaaacctattccccgtctccaggtcttccattcagagcatgggaggactca
gggagcaaaaacatgcttcgagctcctacttctaactccggggtcttccagaaccatcca
ctttcaagtcatcttcagtttaacaacaatatatcgagagcgacatcttttgcggaccag
aatcaaaatcctttcagtaactcattaccatcgtccaggactaaatctggtaatttatac
ggaaagttaccacaatgtgatttcaaagcagcaaagacatggggacattaccacagtgtt
aacaacaacagcaacaacactgagttgtggaacccgaaccagagcggtaatggaaaccct
gagaaaatgttgagcccttccaggatgcctgatgatttagaagagaagttgagacatatg
aacgatgattatggaatggatcaagatgatcttccggttaattatagtcttcaatttact
gatgagcagagtcaaaccccaggaattcagagtccaagaacggaagaaatttacgagaaa
tctgccacgagaatgcccaaaaagtcctctgctattgctactaaacctgaggtcccaggg
aaaagtatgggcaatgcagttgttggcaataaagctttgaaaattgcaccaaggagacat
aaacctcctgctaaagtcgatttctctgtggaacagcgaattctctacgctgatgaagag
agttttgatgcagaagagacacccaccaactttggtgcaatttatagagaagagcaagag
gaccctctcttccgtgatgctggtgatgaaaatgcaatcaaccaggatcaacctaaggaa
tacaaagtggaagacactccagcgtgcttcactcctcgaagcgcgataagtgatctccca
tgtgaggaagaggatgaccaaaacattcatggagaccagaacgcgcagaagaaaaatgag
caagcttaccacaacaatgtggaggatgataaagttgatcttcaacctggtgcaatgact
cctgctttttcgaccaggggtagaaaaagtgggacaatgaccccaaagggttaccaggaa
acgccgatgatgttcagtcgttgttcatccatgtgttccctcagctcatttgaagctcca
tctgtgcaaagtcaagttgaaagtgaaccttctcgattctgcagtggtgtgatcagccca
agtgaattaccagacagccctggtcagtcaatgccagtcagcagaagtcgttcttatagc
aatcttaatgacgttctcaaagaccctagttatatttcaaagcctttacccaacgctcaa
ccaaatgtttccaacagcgagcaaaaggaagaaaagaagcctcaaatccttcaacagtta
agtcgagcgtctgaacatgtgagagcaggttatgtgacaagcttgccacaaaatgacgag
attaagtgctacaactctgagcctgccatgtcagacatgactgctttcagtggtctctct
attggtggagacaaagttgcgcctcttggcatcctaaaaacatctactgactcctcacat
ccggagcttgaaaaagctgggaatcgtttcgttacacaagccggctacatcacttcgctc
ccgactgctgatgagataaaaaactacggatgtgaggggactctttcccccatgacctct
ttgagcgagatcagcgttcttcgtgatcataacgagggattcgtgaagtcaacatccgga
gcaagtccactcaagtcacgtaccggttcccacaaatcaacctcgcgatcttccaacatt
gctcatctcgcatcgctcccagaatcctctcgtagctccggaacacacgcatctacatct
tccgggagcaagtccgatcatgctcttccagttactgacgaaaacgatcatcttgatagg
atagatgacttaggtgatgtggatgacctgagtgattcaggatcacttgggagtctcagt
gatggcgaggatcttctgcaagcttgcatccagtcagcaattccgaaaaaatcatctagc
aggtcttcaagtacaaagccttccagtcgtggcaaggataaatcgatgggaagaaaagct
aacacgtccaaacatcctgtcaaacctgctcctaagaaagaagaaccaatctccaagcag
tctcctctctcccctccagcccaagtccgtcctgttcgcaagtttgacattgacagttcc
cttgccgcggctgagaataagctacaaggcatgcccatactacagtatattgagaagaaa
atctcagaggccccaggtcttagtgatgaagataaggaaacacacgcacatccaaccact
tctaatccatccaagtccgatacattagatgcatcagatatgaccttgactagccaggat
ataactttaaaccagagtgctctggatgcatctgacgctgctaggagatctaaaacatgc
agagaagtgataaagactgtggagacgctcaatgaaagctacagtgtcaagaaacagcta
aaagttttcgaaaaacagcgcacagatgttacaacgcccactacaagtcagtcaccgtgt
aacgttgcatcacgtttggtgcctttcccttcgatgtcaaataatgtcaaagtccaagct
tttctccaaagtcgaccaaacaccttcatgacagaaggcacaccagttgaaatgtcttgc
tctacttcgctaagcaacataaccatcgaatcaggcagtgataattacgatttcgcacaa
ctacaaaaacaaatggttgagcaacaccgagagccaccacaggaaatgaaatattctaca
acaacacaatcagataaaccaacaattcaatccaacaataaaagtgaacaaaacaacaca
gatttattccagcatgctgaagtcccaaacaaccctacatgcagtagcagccaagagata
ttaaacaacctaaacaagcagatagagagccttactatacaaaacactgagacctgtacc
tcgggcactggatatgtgacttctcttccacactcagatgaaattaaacagtttaaaacc
gaaggttccgtaggtgcttacacaatattcagtgctttgaccatcgacagtgagacaaag
attgttcctaaaggaccagaagctcttccagggaggacaaatgatgagagtcctcctaaa
agaagtccgactcaatcaaagatacctgtgaggactcctcctccagtactgaaggaggag
aagtccaggaagtcctctgaatcatccctggaagcaaaggaagaagcagcatctgcatct
cagcattatggggaggatttaattaatgttgtaaaggataatcctctcaatttcggagtt
gaagacaccccgtttcatttatcgggcaacaatagctctctcagttcaatagaaatcgac
tcagatggtgaagggaatgatttgttgaatgcgtgtatatcatcagccataccaagtgct
acttataatatgaacccaccccctgagcctatgcacagtcattacaatgaaaatcatcat
agaccttccactttgcaagctgattctacttaccaaagcaatgctatatgggttgaaatg
aacaaaggtatcccacaaggacaacaccttcttaatgccatcagcccgctctccttggta
tctctcacatcaccagaccccactagtaacagtttcagtataacttctgcaggcactggc
actcagactaatgaagattattatcgcctctcacgccagccatctgtaggggattcaatc
ggttctgagatctctatcggctctcttgtgctcgggggagacgcaaagtcgctcgtgaag
acgcaaaatgccgggaggccgaagatttcaaaagggaaggatgttgaaagagtttcctcg
gatgacaagcctcctgttgtcaagggaggcaagaagatttatcgaagtcccatcacaggg
aagccgagagagaatctcagatacccgaataagcataaggataatacttccactggctcc
tccagtgcaaggatcagggaacatccgaggaacaacaggaacagtgggaggagtaagagt
ccatgtaataaatgtcatcctccgcatcaatcccggcagctcccgatctcttcttccatg
gggaagttggcggaaacatctccgggaagatctcatcggaagacaaatgcatcttccact
tactccaagcagatgcagcccacatgtggtgggaatcctcatgggaaaccatccagatcg
cgcagtgcccacgcaggctatcagtccagtgtaacacagatttatcctcctttaaaacac
gtcaactcgatcatgttgaatggtgttgcatccatggccgccaggggtgacttggtggtt
cagcagcttgaaggtaaaactgctcaagtggttcctgcatctacattagctaaccagttc
caacatgtatctcgaccggtacttatcaagcagggaacttttatacaggacgaaccaagc
caagctctgctccagagcatgtctagaaaaccagaagtgccgaaaaagccggctaagtca
ccgcctaaggcagttaaatcaaaaaaacagagtgaaccgcagcagaaaagcaaaacttta
tggaaaggtttgaaaaagctgctttcaccaagcgatgaggctaagaatattgttccatct
cccaccagaaagacgcctaagaagccccaagttacaacaaggggcaaagtggtacaaaac
caatcggatcgtgtaatagaatcagaagactctagcactgggtttaactctgggacttgg
acaaaaagtaaaactggttccacaagctccagtctacagtctaagcaagtgagaagaaca
cctgaaagaccacaccgcacaccgtctaatgctggtagccagtcttctagtttatcttta
tcgagtagcagcgcaagtaatggtagcagtagctcagtggacgtgtaccaacagccaagc
actcgaatgaatatttacccaacagcaagaaacatgagccctggagcgcatgtcccgaaa
tctccttctgctaaatcacgcatcatcgtcaacagcaaatcacctgctgataaaacaaac
caaggttggcggcgcacaggggactcgcgcatccacagtcgaaagatcagcatggagtct
tcttcttctgcaacctccgcagcagggaacagagcaagtgggaggaaacacggatcacaa
gcatcgatagctacatcatctgacaagagatcggtttctgtggcttcaggtcagagccca
agtgcacggttgttttatgaggtcgtcgaaaacccgtcaagacgaaatccgggtgagggc
gccctccccttcccgtcacccgtgcgccgtgttgtccaggaggtggcgccctttaactac
cgtccatacagaataggtgagagcgaggaagaggaaccaaatcacaaacttgatctcaca
agaaaacagacgacggtttaa
DBGET
integrated database retrieval system
