Ciona intestinalis (yellow sea squirt): 778963
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Entry
778963 CDS
T01056
Symbol
e(spl)/hairy-a
Name
(RefSeq) transcription factor protein
KO
K06054
hairy and enhancer of split 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03460
Fanconi anemia pathway
cin04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
778963 (e(spl)/hairy-a)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
778963 (e(spl)/hairy-a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778963 (e(spl)/hairy-a)
03400 DNA repair and recombination proteins [BR:
cin03400
]
778963 (e(spl)/hairy-a)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
778963 (e(spl)/hairy-a)
DNA repair and recombination proteins [BR:
cin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
778963 (e(spl)/hairy-a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
778963
NCBI-ProteinID:
NP_001071989
Ensembl:
ENSCING00000013835
UniProt:
Q4H3P1
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Position
1:complement(682413..684241)
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AA seq
258 aa
AA seq
DB search
MPVERRMTEAELRRKTNKPIMEKKRRERINKCLEDLKSIVLTAVAEESRPNKLEKADILE
MTVRYLKSLQQGKPIDAGILSLSRTSDYDDSDDDTKSSMTEYSQCDVTTMLNRSDVPLHF
RTQFLGHLADKHNPVERKKPQHHPTQHYSAEFDRRPILMPGKPPHPYQIPLTPTLTFPPT
PISPISSTSFIRRIPSPTSSDDDVTNHVTDCYSPPTPHTSSSDSGVWSSGSSPPSPIQGK
PFNNQPNKPTTVWRPWGL
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgaacgaagaatgactgaagcggagttacggcgaaagacaaacaaaccaatt
atggagaagaagcgacgcgaacgaatcaacaaatgtttggaagatttgaagtcgattgtt
ctcaccgccgtcgctgaagagtcgcgaccaaacaaattggaaaaagcggatattctagaa
atgacggttcgatatttgaagtcgttacaacaaggcaagcctattgatgcaggtatcctc
tctctttcacgcaccagtgattatgacgattctgatgacgacacaaaatcttcaatgacc
gaatactcccaatgtgacgtcacaaccatgttgaatcgtagcgacgttcccttgcatttc
cgcacgcagttcttgggacatctagcggacaaacataacccggttgaacgcaagaaaccg
cagcatcatcctacgcaacattactctgcagaattcgaccgtcggcccattctcatgccc
gggaaaccccctcacccctaccaaatcccacttaccccaaccctaacgttcccaccaacc
cctatttcacctatatcatctacgtcatttatacgtcgtataccctcacccacgtcatcg
gatgatgacgtcaccaaccacgtgactgactgctactctcccccgaccccccacaccagt
agtagcgattccggagtttggtcctcgggttcgagtcccccttcccccattcaagggaaa
ccatttaacaaccaacccaacaaaccaaccactgtgtggcgcccttggggattatag
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