Ciona intestinalis (yellow sea squirt): 778970
Help
Entry
778970 CDS
T01056
Symbol
hnf6
Name
(RefSeq) transcription factor protein
KO
K08026
one cut domain, family member 1 (hepatocyte nuclear factor 6)
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778970 (hnf6)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
778970 (hnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
778970
NCBI-ProteinID:
NP_001071994
UniProt:
Q4H3D3
LinkDB
All DBs
Position
6:complement(392809..412190)
Genome browser
AA seq
764 aa
AA seq
DB search
MPVSLGQSVTTSPSAKSASILNQQHPGIATDFITMATAASGELNGFHHLHHHHHPSEQYY
RHEHYHHHFHHPNFDGYPNYNDRDTPIAGDMQKNNLHNFASKSMSLEGEKLDENCNKSPN
YLPPIGDALLRRDNRSDASKNNAKEEDESGCSKFVMQETDNSLTELQKSSAVSEHEKKEE
VQLKTNDAPEDFSVKTEQSELYQFHARNFSIFTPSSQRGTPDEGMNLIPVETTDHTSIDS
YFRSDATNANPNSNPIDSVPSSVDGPSYATLTPLQPLPSISSVSDKYMPTNETSYATLTN
QELTDCSSYSKMGGMGHSLPPLSNRMILNGLAAQTRGGMQSQAAIDAVNQAAAAAVGLSH
YNKPVLSSNIIPPPPPVSNPYDPHVFGRIDQCNDMGAGFPGGHMFPHRSTGFVSQYGLQD
LSSSLQVSAPSERRRPTHEDIPADNGKRHSGSDRLGGSGLQPHSSNSASSSRTQQIEEVN
TKEVASKITQELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKW
LQEPEFQRMSSLRLAACKRKEDEKSYENSVNSPKKPRLVFTDLQRRTLHAIFKESKRPSK
EMQIQISQQLGLEVTTVSNFFMNARRRSLDKWQDDESGYNSKENSRSNNPSSDHHLSASP
NHQQQQQQQQQQQQQQQQQAYQQHTQDSRLSYAPGESLLSPLCGSPSGHLHFPPPHHLHH
HNLHQQQQNTMLSASHLTSSGLVHPYQSQHQLLGSDVTGLVNPR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgccagtttcgctcggtcagtctgtgactacttctccctctgcaaaatctgcatcaatt
cttaaccagcaacatcccggaatagcaacggacttcatcactatggcaaccgctgcatcc
ggagaactgaacggtttccaccatctgcatcatcaccaccatccatcggagcaatattac
aggcacgagcactatcaccatcacttccaccaccccaactttgacggttaccccaactac
aacgatagagatacccctatcgctggagacatgcagaaaaacaacctgcataatttcgca
tcgaaatcaatgagcttggaaggtgaaaaattggatgaaaattgcaacaagtctcctaac
tatcttccgcctatcggagacgctcttcttcgtcgtgacaatcgttccgatgcctcgaag
aacaatgcaaaggaagaagatgagagcgggtgctcaaaattcgtgatgcaagagaccgac
aactctctcacagagctccagaagtcctccgcggtcagcgagcacgagaaaaaagaagaa
gtgcagttgaaaactaacgatgcgccggaagatttttcagtgaagactgagcaatcagag
ttgtatcaattccacgcgaggaacttctcaatctttactccatcatcccaaagaggtact
ccggatgaaggaatgaatcttatccccgttgagaccacggaccacacatcaatagattct
tacttcagatccgatgcaaccaatgccaaccctaacagcaacccaatagacagcgtccct
tccagcgtcgacgggccaagttacgctactctcacacccctacaacctctgccatcgata
tcatcagtttccgacaaatacatgcccaccaatgaaaccagctacgcaactcttaccaac
caagagcttaccgattgcagcagctactcaaaaatgggcggaatggggcacagtttacct
ccgctttcaaacagaatgatcttgaacggtcttgcagctcaaactcgtggaggaatgcaa
tcacaagctgctatagatgcggttaaccaagcggcagctgcagcagttgggctttcacat
tacaacaaaccagtgttgtcatctaatataataccaccaccacctccggtttcaaacccc
tacgatccccatgttttcgggaggattgatcaatgcaatgatatgggtgctggctttcct
ggcgggcatatgtttccgcatagaagtactgggtttgtatcacaatatgggctccaagac
ctatcttcatcactccaagtcagcgcgccttctgagcgaagaagaccgactcacgaagat
attcccgccgacaatggaaagcgccattccggcagcgatcgcctcggagggtcgggcctg
cagccgcattcatctaactccgctagttcttcccgcactcaacagatcgaagaagtcaac
acgaaagaggttgcttcgaaaatcacccaagaacttaaacgttatagcatcccgcaagca
atttttgcacaaagggtgctttgtagaagccagggcacactttcggatcttctacgcaat
cctaaaccgtggtcaaaactgaagagtggacgcgagaccttccgaaggatgtggaaatgg
cttcaggaaccagagtttcaacgtatgtcatctttaaggcttgccgcttgcaaacgaaaa
gaggacgaaaaatcttacgagaactcggtcaattctccgaagaaacctcgcttagttttc
acagatctgcagcgtagaactttacacgctattttcaaagaaagcaaacgcccttctaaa
gaaatgcagatacaaatctctcaacagttgggtttagaagtcacaactgtgagcaatttc
tttatgaacgctcgaaggagaagtttagataaatggcaggacgacgaatcagggtataac
agcaaggaaaactcacgttctaacaacccatcaagcgatcaccatctaagtgcgtcgcct
aaccaccaacaacagcagcagcaacaacaacaacaacagcaacaacagcagcaacaagcg
tatcaacagcatacacaagacagtcgtttaagttatgcgccaggagagtctcttctttcc
ccgctctgtggctcccctagcggccatttgcacttcccaccccctcaccatttgcaccac
cataacttgcaccagcagcagcaaaacacaatgttatcagcgtcacacctaacctcgtcc
ggtctagtacacccgtaccagtcacagcaccagcttctaggctctgacgtcacggggttg
gtgaatccccgttag
DBGET
integrated database retrieval system
