Ciona intestinalis (yellow sea squirt): 778979
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Entry
778979 CDS
T01056
Symbol
nodal
Name
(RefSeq) transforming growth factor beta superfamily signaling ligand precursor
KO
K04666
nodal
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
778979 (nodal)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cin04052
]
778979 (nodal)
Cytokines and neuropeptides [BR:
cin04052
]
Cytokines
Transforming growth factors (RSTK binding)
778979 (nodal)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
Stb3
PTP_N
Motif
Other DBs
NCBI-GeneID:
778979
NCBI-ProteinID:
NP_001072000
Ensembl:
ENSCING00000001251
UniProt:
Q4H337
LinkDB
All DBs
AA seq
415 aa
AA seq
DB search
MISMFNIAAFVFTMTSIFVNGESVTSSNPTNAEALLRHMQQRSNAVRSKYMMELYRAKNT
GMPTNNALKRSDIVRSFRSIESYKVGSRLVVVFDLSSVPRERIRGSELQVDRSLSDVTMI
ELWEGVNAESRRKIGTMRYIRTNKSFDTTSQIRRWHRGDSPVTPFHASGAILPLTPLLVV
YSNNHHYDLIEASESRMNRQRRSSRGRHSNRYRKRRYRVNKNKTRKSTLRHNDVEITSHA
QQKSQRISNDFELSTSSADDVTIQSGNEYDVTDEWRKQQSDDVKVVKAKHPVSPQRKHPF
IISTPAPRVGATHCRKVSFEIDFEKIGWGSWIVYPKKYNAYRCEGQCRTPMRSDSKPTNH
AYMQSIIATKRPDLHIPQPCCVPTKLKPLSILYYEDGEVKQRDHEDMVVDECGCR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgatttctatgtttaatatcgctgctttcgtcttcactatgacgtcaatatttgtcaat
ggagaatccgtgacgtcatcaaacccaacaaacgccgaagcattgttacgtcacatgcaa
caaaggagtaacgctgttcgatcgaaatacatgatggaattgtaccgagccaaaaacaca
ggaatgccaaccaacaacgcgttgaaaagatccgatattgttagaagcttcagatcaatc
gaaagttacaaagttggttcaaggttggtcgtcgtgttcgacctttcatccgtcccacgt
gagcgaatcagagggtcagaattacaagtggatagaagcctcagtgacgtcacaatgata
gaattatgggaaggtgtaaacgctgaatcgcgtcgtaagattggaacaatgagatatatt
cgaacgaacaagagtttcgacacaacttctcaaataagaagatggcaccgcggtgattcc
cccgtcacccccttccacgcatcgggggccatcttacccctcaccccattgttggtcgtg
tattctaacaatcaccattatgacctcatagaagcgtcggaatcgcgaatgaaccgacaa
cgacgatcgtcacgtggtcgacactccaacagataccgaaaacgacgttatcgagtgaat
aagaacaaaacccgcaagtcaacgttgcgtcacaatgacgtagagataacatcacacgcc
cagcaaaagtcgcaaagaatttccaacgatttcgaactttctacgtcatcagctgatgac
gtcacaatccaaagtggcaacgagtatgacgtaacagatgaatggcgaaagcaacaaagt
gatgacgtcaaagtagtgaaagcgaaacacccggtgtcgccgcagagaaaacatcctttc
attatttcgaccccggcacccagggttggggccacacattgtaggaaagtgagtttcgag
attgactttgagaagataggttggggttcatggattgtttaccccaagaaatacaacgcg
tatagatgcgaggggcaatgtaggacacctatgaggagtgacagcaaaccaaccaaccac
gcttatatgcaaagtatcatcgcaaccaaacgccctgaccttcacatacctcaaccatgt
tgtgtgccaaccaaacttaaaccgctcagtatattatattatgaagatggagaagttaaa
caaagagatcacgaagacatggtcgtcgacgaatgcggttgcagataa
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