Ciona intestinalis (yellow sea squirt): 778983
Help
Entry
778983 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC778983 isoform X1
KO
K20211
prospero homeobox 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778983
Transcription factors [BR:
cin03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain PROS
778983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPD
ARGLU
NuA4
GIT_CC
Motif
Other DBs
NCBI-GeneID:
778983
NCBI-ProteinID:
XP_002122608
LinkDB
All DBs
Position
4:539917..547784
Genome browser
AA seq
988 aa
AA seq
DB search
MLTSTRRHRSVDTSSPYSVRLPSEFDDQLEETRATSPQSKGFSLSPYGELRSTEDVSIPE
ENMSSPLNCSGPIGAGFISDDSEDIKSADEYNVKPTPAEVFSPDAKDARDSADSVASVSE
QDSMKIAADSTIEGARDQSIKAQSGDVIRLNAKRARVENIVTNIRVKPDRVLSPTASSSK
SDQNAMRSSSAPINTLPNRKRHLSEQIRSLQEQISNLQHEYHNGTSPSSMALSQPDAKTM
KETTLTSARDSESELVKQNIDEIVKAASSPSQFISQAMKLVAAVSGAEKSSVAGTGESMA
EGWGHQQPKRQCLDTDDEFVDSPMKIQPRYQAAIKLSVTDALNEDEVNSSYQILVKTLKK
ELALAFEAVAEKSAKRILQELRLKLPSNKQVCDATEHDDDQESSVFYQSDRQQKNLGNPE
DHNGKEHLDSNLYSRPNVSSFIVEGKQEKMRTTSQSQMCFGNVEVRKRSSAGNTKPNSPR
DGSIYPGLPSVYGRYQGSNVNPVEATHHENLIQSRSSSVNDRPQTQALSLVTRKLTKDRN
QSPSSFDSLTNDDAGDDIGRCSSNDIDSDARLPSTAKLQSASVGPQTNCHLQHAASIQRK
LSRDSPSITNTSKTQRRSRSRSPDFMESKQQPSTSPYLARPGYSAKDPSFFASANWPSIP
DSSAFRNTLGHQSLSPTHDHYSRFFKPENIRNKVRSVNMSGSMGQHKTPLSTPMIGGSMF
RNPSYPPASNTSSSIYPFTSPQLPFPLHPVFQQGHLARALASDYNRIRDSFDPSGGIRFI
STRTPTRDTIKPRASMLSGHHIDSKCVSPDYGSPCSDVGAYSSSMQEGLTPQHLKKAKLM
FFYTRYPSANMLKAYFADVKFSRATTSQLIKWFSNFREFYYIQMEKFARQALTEGITDVN
QILVTRDSEILRVLNLHYNKSNDFRVPDQFIDVTQTSLQEFYLSIKAGKDRDPAWKKVIY
KVICKLDHDVPDIFKSANVLDRLCDAHL
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgttgacatcaacaaggcgacacaggtctgttgataccagttcaccttattccgtccgt
ctaccttccgagttcgacgatcaactagaagaaactcgcgccacatctcctcagtcgaaa
gggttttctttatcgccatacggagaacttagatctacagaagacgtttccatacccgag
gaaaacatgtcatctccattaaactgtagtgggccgatcggcgccggtttcatttccgat
gattctgaagacatcaaaagtgcagatgaatataatgtgaaacccacaccagcagaagtg
ttttcaccggacgcaaaagacgcgcgcgattcggcagactccgttgcatctgtttccgaa
caagattctatgaaaatcgctgcagattctacaatagaaggtgctcgtgatcagtcgatt
aaagcgcaatctggagacgtgattcgactgaatgcaaaaagggcaagagttgagaatatt
gtgaccaatattagagtgaagccagatcgagtcttatcgccaacagcttcgagttcaaaa
tctgatcagaatgctatgcgatcgtcttcagctccaataaacaccttaccgaatagaaaa
cgacatttaagcgaacagattcgcagcctgcaggaacaaattagtaacctacagcacgaa
tatcataacggcacatcaccatcatcgatggcgctaagccagcccgatgcaaaaacgatg
aaagaaactactcttacgtcagcaagagactctgaaagtgaattagttaaacaaaacata
gacgaaattgttaaagccgcgtcttcccctagtcagttcatcagccaagcaatgaaacta
gttgcagcagtttcgggtgcagaaaaatcttctgttgctggtaccggggaaagtatggca
gagggatggggacaccagcaacctaagagacagtgcttggatacagatgacgagtttgtc
gattcaccaatgaaaattcaaccacgttaccaggctgcgatcaaactgagcgtgaccgac
gctttgaatgaagatgaagtaaattcgtcgtaccaaatactcgtaaaaactttaaagaag
gagttggcccttgcctttgaagcagtggcagaaaaatctgccaagcgcatcttacaggag
ttaaggttgaagctgccatcaaataagcaagtttgcgatgcaacagaacacgatgacgac
caggaaagttcggttttctaccaaagtgatcgacagcaaaaaaacttaggaaaccctgaa
gatcataatgggaaagaacacttggatagcaatctgtattcaagacccaatgtttctagt
ttcattgttgaaggtaaacaagaaaaaatgcgaactacaagtcaatcgcagatgtgcttt
ggaaacgtcgaggttagaaagaggtcttcggccggaaatactaaacccaatagcccgcgc
gacggttccatttatcccggtctgccttcggtatacggtcggtaccaaggatccaatgta
aacccggttgaggcgacccaccatgaaaaccttatacaatctagaagttccagtgtcaac
gatcggccacaaacacaagccttatccttagttacaaggaaacttactaaagatcgcaat
caaagcccttctagtttcgattctcttacaaatgatgatgccggagacgacatcggacga
tgttccagtaatgatattgattcagatgctagacttccttcgactgctaaactccaatct
gcatcagtaggaccacaaacaaactgtcacttgcaacacgcagcttccatccaacgaaag
ttatccagagactccccatcaattacaaacacctcaaaaacccaacgaagaagtcgtagt
aggtcgccagattttatggaaagcaagcagcaaccatctacctcgccgtatcttgcacgt
cccggttattccgctaaggatccatctttcttcgcttctgcaaactggccatccattccg
gattcatcagctttccgcaatacgcttggtcatcaatcactttcacccacccacgatcat
tacagccgattctttaaacctgaaaacataagaaacaaagttcgttcagtgaatatgtcg
ggttcaatggggcagcataagaccccactttccacccctatgatcggaggctctatgttt
cgtaacccatcttatccaccagcatctaatacatcgtcttcaatctaccccttcacttca
cctcagcttcctttcccgttgcatcctgttttccagcaggggcatcttgccagggctctt
gcaagcgactacaaccgtattcgagacagctttgatccgtccgggggaattcgatttatt
tcaaccagaacaccaaccagagatacaataaaaccaagagcttcaatgttaagtggtcat
catatagattcaaaatgcgtttctccagactatgggagtccatgctccgatgtaggagcc
tactcgtcatcgatgcaagaaggccttactcctcaacatttgaaaaaggcaaagttaatg
ttcttctacacccgatatccaagtgcaaatatgttgaaagcgtactttgccgatgttaag
ttttctcgtgccaccacttcgcaactgatcaaatggttcagcaactttcgggagttctat
tacattcaaatggaaaagtttgcccgccaagcacttactgaaggaataaccgatgtaaac
caaatcctggtgacacgggacagtgaaatactacgagttctcaatcttcactacaataag
agcaacgattttcgagttccagatcaattcatcgacgtcactcaaacaagcctacaggag
ttttacctgtcaatcaaagctggcaaggacagagacccagcgtggaagaaagtaatctac
aaagtgatttgtaaactagatcacgatgttccggacatttttaagtccgcgaatgttctc
gatcgactctgtgacgcccacttgtga
DBGET
integrated database retrieval system
