Ciona intestinalis (yellow sea squirt): 778997
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Entry
778997 CDS
T01056
Symbol
arfgap-6
Name
(RefSeq) zinc finger protein
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
778997 (arfgap-6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
778997 (arfgap-6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
778997 (arfgap-6)
Membrane trafficking [BR:
cin04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
778997 (arfgap-6)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
778997 (arfgap-6)
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
778997 (arfgap-6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank_5
Ank
Ank_3
Ank_4
PH_11
PH_21
p450
BAR
PH_alsin
SOS1_NGEF_PH
UBA_9
PH_6
Motif
Other DBs
NCBI-GeneID:
778997
NCBI-ProteinID:
NP_001072017
Ensembl:
ENSCING00000006167
UniProt:
Q1RQ02
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MTISLEFEECIKDSPKFRDLVHQSEVDVVDLESQIDRMVKHCSVMVDSGKVYNNACKGFI
GSVNDVGYASTDDAFVQGTLKRFTSTMSELSSFHTMLFDQAQRSVRTQLNNFLREEVKPT
KDLKKTFDKVSDDYLSSLNKHAAANKLKPNEVEDTNSVLTSSRNCFRSVAMDYVYQINML
HKKKKFQSVDKILSYMHALFTFFHQGYDLLKDLEPYMKSVSGQLEEMCKRNEESRKSMIV
EQERHQSMTGDSGMYMTCVNNAIVIEGHLFKRASNAFKTWNRRWFTIKDNKLFYQKKKDD
LTVVVDDIRLCTVRLTEETERRFCFEVVLPGKSFLLQAESDDARTAWIKAIQSSIGAAFK
DTMEETNSQQIMSLPVNKILTPVSTAASLSRTSSSSSSNSNLSNETTLNKKETKSGENTN
PTSFLEEGANNVMSKIYQVPGNKTCADCGKAEPRWASISLGITLCIECSGCHRSLGVHIS
KVRSLTLDQWEPEVVKVMLKLGNSRVNEIYTANATSDDQIKPGSSNDSRLAFIQAKYVDR
KFAMPLPKALGPQPAYHGATGRRLTRWTVSKRKRTRPSPNRSPNRPRSPKPAVQIHIEPV
DGGGGDAVSSQGEDETDDRDDIIVFGHSVASDGKEYEETEICKLENLHPDLLLYRATEAA
NLPVMLLAKCNKAKVNWMNDADEGKTALMQAAIVGSVPACEFMLANGAKIETFDWKKRTA
LHYAALHNHTSVACQLLKRRMDLNAVDEDGKSALDIAVDEANADIVTLIRLKKMSDEMKE
DNSSTSQTDALVTDVFRDFSQRTFPNLHSPDPSDANQKFNILGATLLTPETRQTTSTDDS
ASSAGSVSSEKKTLHLMSDEEPNVESTV
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaccatttcactggagtttgaggaatgcattaaagactcacctaagtttcgagacttg
gtacaccaatcagaggttgatgttgtggacttggaatcacagattgatcggatggtaaag
cattgctcagtaatggtggattctggaaaagtttacaacaatgcatgcaaaggttttatt
ggaagtgtgaatgatgttggatacgcctcaaccgatgatgcttttgttcagggtacatta
aagagatttacaagtacgatgtcagaactctccagtttccacacgatgttgtttgatcaa
gcacagcgttcagtaagaacacaattaaacaactttttaagagaggaggttaaacctacc
aaagatttaaaaaaaactttcgacaaagtttctgatgattatctttcctcacttaacaaa
catgctgctgccaacaaacttaaaccaaacgaggttgaagacacaaattctgttctaact
tcatcaaggaattgtttcagaagtgtggccatggattatgtataccagatcaatatgctg
cacaaaaagaagaagtttcagagtgttgataagattctgtcatacatgcacgcactcttc
actttcttccatcaaggatatgatttgttaaaagatttggaaccgtatatgaaaagtgtg
tctggccagcttgaagaaatgtgcaagagaaacgaagaaagtagaaagtcaatgattgtt
gaacaagaaagacatcagtccatgactggtgatagtggaatgtacatgacttgtgttaac
aatgctattgttattgagggacatctatttaaaagagcaagcaatgcatttaaaacttgg
aacagacgttggtttaccatcaaggacaacaaacttttctaccaaaagaaaaaggatgat
ctcactgttgttgtggacgacattcgtctgtgcactgttcgcttaactgaagaaacagag
cgaaggttttgtttcgaggttgtccttcctgggaagagcttcctcctccaagctgagtcg
gatgatgcgaggacagcttggatcaaggccattcagtcaagtatcggagctgcgtttaaa
gacacgatggaggaaacaaactcacagcaaataatgagtcttccagtaaacaagattctt
actcctgtctccacggctgcgtcgctctcccgaacttcttcatcttcatcttcaaacagc
aacttgtcgaatgagacaacattgaacaaaaaagaaaccaaaagtggagaaaacacaaat
ccaacatctttcttagaggaaggagcaaataatgtgatgtcaaaaatttatcaagtacct
ggaaataaaacttgcgctgactgtggaaaagcagagccaagatgggcaagcataagtctt
ggtattactttatgtattgaatgtagtggatgtcatcgaagtcttggtgttcatatttct
aaagttcgatcgctgacattggatcagtgggaacctgaagtggtcaaggtgatgcttaaa
cttggcaacagtcgagtgaatgaaatctacacagcgaacgcaacgtccgatgatcaaatc
aaacctggttcctctaatgatagccggttggcattcatccaagcaaaatacgttgaccgt
aagtttgcaatgccacttcctaaagcccttggtccgcaaccagcttaccacggagctacg
ggaagaagactaacaaggtggacggtaagtaaaagaaagaggactcgtccctcacccaat
agatcaccaaaccgaccacgatcacctaagccagcagttcaaatccacattgagccggtt
gatgggggtgggggtgatgctgtttcttcacaaggggaagatgaaacagatgatcgagat
gatatcatcgtgttcggacattctgtcgcttctgatgggaaagaatacgaagaaacggag
atttgtaaattggaaaatcttcatccagatttattgttgtacagagcaacagaagctgcc
aacttaccagttatgttgttggcgaaatgtaacaaagcaaaagtaaattggatgaatgat
gctgatgaggggaaaactgctctcatgcaagctgctattgtgggttcagtcccagcatgt
gagttcatgttggccaacggagctaaaattgaaacatttgattggaagaagagaactgct
ttacattatgctgcattacacaatcatacaagtgttgcttgtcaattgttgaaacgtcga
atggatttaaatgcagttgatgaggatgggaaaagtgctctagatatcgctgtggatgaa
gctaatgcggatattgttacattaattcgtttaaagaaaatgagtgatgagatgaaagaa
gacaactcctccacatcacaaacggatgcgcttgtgaccgacgtctttcgtgatttttct
caacgaactttcccgaaccttcattcccccgacccatcggatgcaaaccagaagttcaac
atccttggagcaactctcctcactccagaaactcgccaaacaacatccacagatgattcc
gcatcttctgcaggatcagtgtcctcggagaagaagactttacatctgatgagtgatgaa
gagccaaatgttgaatcgactgtatga
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