Ciona intestinalis (yellow sea squirt): 779002
Help
Entry
779002 CDS
T01056
Name
(RefSeq) beta-1,4-galactosyltransferase 7 isoform X1
KO
K00733
xylosylprotein 4-beta-galactosyltransferase [EC:
2.4.1.133
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cin00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cin01100
Metabolic pathways
Module
cin_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
779002
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
779002
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
779002
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.133 xylosylprotein 4-beta-galactosyltransferase
779002
Glycosyltransferases [BR:
cin01003
]
Glycan extension
O-Glycan
779002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7C
Glyco_transf_7N
Motif
Other DBs
NCBI-GeneID:
779002
NCBI-ProteinID:
XP_002121762
Ensembl:
ENSCING00000012188
LinkDB
All DBs
Position
5:3089324..3093955
Genome browser
AA seq
319 aa
AA seq
DB search
MAAIRYQVGLLLFTVVAVCVLYDETDRYYFKKPKQFDLPEQKDKDLNRLLATTSDKVLKG
DDPAWGKHRLAVIVPYRGAFEELLLFVPHLHKFLCDRRIRHKIFVIHQVDKFRFNRGFLI
NVGFLLSRDKFDYLAMHDIDLLPINPMLNYSYPEQGPYHLSSPEYHPDYHGRRFIGGILL
FTREDFTKVKGMTNGDWGWGGEDNELFTRIRLSKLKLTRASGLTTGRNTFKNTHDESKRP
RDKERFDAIKGNQFELDGKYGFHNADYKLERVVNMKIDEADVTIYNVKLHCNILETPWCQ
TNYTVSDFKKQKNKNAIKN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgatcagataccaagtcggtctgttactcttcaccgtggttgcggtttgcgtg
ttatacgatgaaaccgatagatactattttaaaaagcctaaacagtttgatctaccagaa
caaaaagacaaggatctgaatcgtttattggcgaccacatcagacaaggttctcaaggga
gacgacccggcgtggggaaaacatcggttagcagtgattgttccttacagaggagcattt
gaggaactccttctgtttgtacctcatctgcataagtttttgtgtgacaggcgcatcagg
cacaaaatattcgtaattcatcaagtggataaattcagatttaacagaggtttccttatt
aacgtcggatttcttttatctcgagacaagtttgattatcttgctatgcacgatattgac
ctactgcccatcaacccaatgcttaattactcatacccggaacagggtccgtaccatctg
tcgtctcccgaatatcatcctgattaccatggtcgtcgttttatcggaggaattctgctt
ttcaccagagaagacttcactaaggttaaaggaatgaccaatggtgactggggttggggt
ggagaagataacgaattgtttacaagaataagattatcgaaactgaagttgactagagcc
agtggacttactactgggagaaacacttttaaaaacacacatgatgagtcgaagcgacca
agagataaagagagattcgatgcaattaagggtaatcagtttgaattagacggcaagtac
ggctttcataatgctgactacaagctggaaagagtcgtaaacatgaagattgacgaagct
gatgtaacaatatataatgtcaagctacattgcaacatattggaaacaccttggtgccaa
acaaactatacagtgagcgacttcaaaaaacagaagaacaaaaacgccattaaaaactaa
DBGET
integrated database retrieval system
