Ciona intestinalis (yellow sea squirt): 779004
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Entry
779004 CDS
T01056
Name
(RefSeq) transcription factor GATA-3
KO
K17894
GATA-binding protein 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
779004
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
779004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GATA
DUF7573
Zn_Ribbon_TF
ArfGap
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
779004
NCBI-ProteinID:
XP_002122567
Ensembl:
ENSCING00000015930
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MMPTSSEQHRWFHHPTMTSSHHPEVTCAGSFASSGGGHGIPPYMDTGYREDMDAYLHHID
GQSGYYGLQYRAHQRSLNAAAVARVEAERSCAVRSSHFHHQNHPHVSPGAGGGLPTWLGS
SVPKSSVFGPLQTPSISSHRPNIWNAPPSKDTEFSRYVYPPPSLVKTEEGGTTSREDCDD
VGRPCASNIGCETTEPATSKAFHVFPTPPKDDDPSLTPSSGTPPVRAPPHNRPPQPSPSM
DCHQIYHRQSSKPDIPVCNDVTSCSIMPHPTYPYISPSVGEYPVTGTSYPNAGESGKVTS
SYSNNGKSKPKNRSSTEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIK
PKKRLSAARRAGTSCSNCSTTTTTLWRRNASGDPVCNACGLYFKLHGVNRPLTMKKEGIQ
TRNRKISTKLKKSSVCRDPRFDATNFKFFDGSSGFGAAAAAAAAYSGQFGQMHTFGGVHP
HHHPHMAHHLTAGSAGFANSHHPMLPPPPHHTMHPPHPTPPAAPGSANLTLSLNHSSMVH
AMG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaacaagtagcgagcaacatcgatggtttcatcaccccactatgacgtcatcc
caccacccggaagtgacgtgtgcggggtcatttgcatctagtggagggggccatggtata
ccaccatatatggacacggggtaccgagaagatatggacgcttacctccaccatatagat
ggacaaagtggttattatggattacaatacagagctcatcaaagatcgctcaacgctgca
gcagttgctcgtgtggaagctgaaagatcatgtgcagtaagatcgtcacattttcaccat
cagaatcacccacatgtatcaccaggggctgggggtggcttacctacatggttaggatca
tctgtaccgaagtcctcggtgttcggaccactacaaaccccgagtatttcatcgcatcgt
cctaacatatggaatgcgccaccgagtaaagataccgagttctccaggtacgtttaccct
ccgccatcattggtgaagacagaggaagggggaaccacctccagggaagattgtgatgac
gtaggaagaccatgcgcttctaacattggatgtgaaaccaccgaacccgcgacctcgaaa
gcgttccacgtcttcccgaccccacctaaagatgatgacccctccctcacgccatctagc
ggtaccccccctgtgcgggctcccccccataatcgacctccacaacctagtccttccatg
gattgccaccaaatttatcatcgacaatcctccaaacctgacatcccagtctgcaatgac
gtcacatcatgttccatcatgccccacccaacttacccctacatctcacccagcgtgggg
gaatacccggttacgggtacatcttacccgaacgctggagagtcaggcaaggtgacgtca
tcatactcaaacaatggaaaatcgaagccaaagaaccgatcaagcacagagggtcgcgaa
tgtgttaactgtggagcgacagcgactccattgtggcgtcgagatgggacgggacattat
ctttgtaacgcgtgtggtctctaccataaaatgaatggacaaaaccgaccgcttatcaaa
cccaagaaacgattgtctgcggcgcgacgagccggaacgagttgttcaaattgttcgacc
actaccaccaccttgtggcgaagaaatgcaagcggggatccggtgtgtaacgcgtgtgga
ttgtacttcaaactgcacggggtgaatcgtccgctgaccatgaagaaagaagggatccaa
accaggaaccggaagatttctacgaagctgaaaaaatcatctgtatgtagggacccgaga
ttcgacgcgaccaatttcaaattctttgacgggtcgagcggtttcggggcagcagcggca
gcggcggccgcctattccggtcagttcgggcagatgcacacgttcggtggcgttcacccg
catcaccatccacatatggcacatcacctaactgctggttcagctgggtttgccaactcc
catcatccgatgttacccccgcccccccaccacaccatgcaccccccacaccccacacca
cctgccgcaccagggtcggcaaatctaacattaagtttaaaccatagtagtatggtacac
gcaatgggctga
DBGET
integrated database retrieval system
