Candidatus Campylobacter infans: CINF_0774
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Entry
CINF_0774 CDS
T07502
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cinf
Candidatus Campylobacter infans
Pathway
cinf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cinf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CINF_0774 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cinf03021
]
CINF_0774 (rpoC)
03400 DNA repair and recombination proteins [BR:
cinf03400
]
CINF_0774 (rpoC)
Enzymes [BR:
cinf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CINF_0774 (rpoC)
Transcription machinery [BR:
cinf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CINF_0774 (rpoC)
DNA repair and recombination proteins [BR:
cinf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CINF_0774 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_S24
Motif
Other DBs
NCBI-ProteinID:
QLI05290
UniProt:
A0A7H9CGQ8
LinkDB
All DBs
Position
738661..743343
Genome browser
AA seq
1560 aa
AA seq
DB search
MNKELELIEIKEDRRPRDFEAFELGLASPEEIKKWSHGEVKKPETINYRSLKPEVDGLFC
ARIFGPIRDYECMCGKYKKMRDKGKVCEKCHVEVTSSKVRRSRMGHIDLVTPVAHIWYVN
SLPSRIGTLLGVKMKDLERVLYYEAYIVKNPGDAYYDWENSKKVEKYDVLNEEQFLALEQ
RYGQTGFDARMGGEIIRELLGELDLLAILNELKLEIEATNSDAKKKTIVKRLKVVESFLN
SGNHPEWMMITTLPVLPPDLRPLVNLDGGKFAVSDVNDLYRRVINRNTRLKRLMELDAPE
IIVRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDF
SGRSVIVVGPRLQMDECGLPKKMALELFKPHLLARLEEKGYATTVKQAKKMIDERTNEVW
ECLEEVVKDHPVLLNRAPTLHKMSIQAFHPVLIEGEAIQLHPLVCAGFNADFDGDQMAVH
VPLSQEAIAECNVLMLSSMNILLPASGKAVTVPSQDMVLGIYYLSLEKDDAKGENKIFAS
VDEVSIAEQAGLLDLHARIKTIIDQQSVVTTAGRLIIRSILPEMGSNNVPENMWNKILKK
SDIANLVNYVYKYGGLSVTASFLDAIKNLGFRYATKAGISISITDIIVPDSKYSFVDEAK
KKVLSLQKEYDAGLLDDKTRANLVIDTWASTSKKVQADMMEHIIADKSGFNSIYMMADSG
ARGSVGQISQLAGMRGLVTKSSGNKSAAGAQIIDVPITSNFRDGLSVLEYFLSTYGARKG
LTDTALKTANAGYLTRKLIDVAQNVKVTMEDCGTHEGVEVSELKNGEELVESLEDRILGR
VLSDDVIDPITNEVLFTEGTLISEQAARTIVDSGIKAVTIRTPITCKAPKGVCSKCYGIN
LGEGKLVRPGEAVGIIAAQSIGEPGTQLTLRTINSGAAATNFQQEFQVVAKKEGFIRYYN
LEIDESNFVISRRNAAILLVEPKVKAPFDGVVDIEISHEDISIIIQGKKDEFRYTFRKRN
LAASNELAGVSGMIEGKYYLPYKKGDKVKENESIVEVVREDWSVPNRIPFASEIKVANGD
PVTQNIKANAEGLLKFYVLKGDYLERTKSIKKGDVVEEKGFFVVVADDEDREAARHYIPR
QSVINFNDSDRVNNNDIIASPKKDEKLIIAQWDPHSTAFRAAESGKVKFEFISTEDHELI
PKDLKKGDVRAELIKDMGDSNTGTKIRISANAEISSDNASDDGKMVMLSNSLLRTAQSSG
TKDRDSRAQAAIVIVNGSKSVKYPVEKDDIIIVRPDQEIKKGDVIFSRPKAVATSKDITA
GLPKVSELFEARKPKDTAYIAEIDGVIEIDTHLKSKTRISISASDGTSIDYNIDKTRQIL
VRDGEFVHVGEKLTDGVISSHDVLRILGEKELHSYLIRGIQDVYRSEGVIISDKHIEIII
SQMLRQVKIVDSGDTHFIVGDMISRRKFREENSKILRMGGEPAIAEPILLGVTRASIGSD
SVISAASFQETTKVLTEASIASKRDFLEDLKENVILGRMIPVGTGLYKDEELKLKANDVD
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaattagagctaattgagattaaagaagatcgcagaccgcgtgattttgaa
gcatttgagcttggacttgcaagcccagaagaaattaaaaaatggagtcatggagaggtt
aaaaagccagaaaccataaactaccgctcattaaagccagaagtagatggtttattttgt
gcgagaatttttggcccgatacgagattatgaatgtatgtgtggcaaatacaaaaaaatg
cgcgataagggcaaggtatgcgaaaaatgccatgtagaagttactagctcaaaggtgcgc
cgttctagaatggggcatattgatcttgttacgccagtggcgcatatttggtatgtaaat
tccttaccatcgcgtataggcacgctacttggtgtgaagatgaaagatttagagcgtgtg
ttgtattatgaagcatatatagttaaaaatcctggcgatgcttattatgactgggaaaat
agcaaaaaagtagaaaaatacgatgttttaaacgaagagcaatttttagccttagagcaa
cgctacggccaaactggctttgatgctagaatgggtggcgagattataagagagctatta
ggcgagcttgatttgctggctatattaaatgaattaaagctagaaatagaagccacaaac
tcagatgccaagaaaaaaacaatagtaaaaagattaaaagtagtagaaagctttttaaat
agtggcaatcaccctgagtggatgatgattactaccttgcctgttttgccacctgatttg
cgcccgcttgtaaatcttgatggcggtaagtttgccgttagtgatgtaaatgacttatat
cgccgcgtgattaaccgcaatacgcgcttaaaaaggcttatggagcttgatgcacctgag
attattgtgcgcaatgaaaaaagaatgctccaagaagctgttgatgcgctttttgataac
ggacgccgtgcaaacgccgtaaaaggcgcaaacaaacgcccgctaaaatctttaagtgag
attattaaaggcaaacaagggcgttttcgtcaaaatttattaggcaagcgtgtggatttt
agcggacgctctgtaatagtagtaggccctcgcttacaaatggatgagtgtggcttgcct
aagaaaatggcgcttgaattatttaagccacatcttttagcaaggcttgaagaaaaaggc
tatgccactactgttaaacaagctaaaaaaatgatagatgagcgcacaaatgaagtttgg
gaatgccttgaagaagtggttaaagatcaccctgtgctactaaaccgcgcgccaaccttg
cataaaatgtcaatccaagccttccatcctgtgttgattgaaggcgaggctatacaatta
cacccgctagtgtgcgctggctttaatgctgactttgatggcgatcaaatggctgttcat
gtgccgctaagccaagaagccattgctgaatgtaatgtgctaatgctaagttctatgaat
attttattgccagcatcaggcaaggctgtaaccgtgcctagccaagatatggttttggga
atttattatttaagcttagaaaaagacgatgcaaaaggcgaaaataaaatttttgctagc
gttgatgaagttagcatagcagagcaagcaggtttattagatttacacgcgcgcattaaa
accataatagaccaacaaagcgtagtaacgacagctggacgcttaattatccgctctatc
ttgcctgaaatgggatcaaataatgtcccagaaaatatgtggaataaaattttaaaaaaa
tcagacatagcaaatttagtaaattatgtctataaatatggcggattaagcgttacggca
agctttttggacgctattaaaaatttaggatttagatacgctacaaaagcaggcatttct
atatcaattactgatataatcgtccctgatagcaaatatagctttgttgatgaagctaag
aaaaaggttttaagcttacaaaaagaatacgatgcaggtttattagatgataaaactcgc
gccaacttagtaattgatacttgggcaagcactagcaaaaaagttcaagccgatatgatg
gagcatataattgctgataaaagtggctttaattcaatttatatgatggcagattcaggc
gcgcgcggtagcgtagggcagattagccagctagctggtatgcgcggacttgtaacaaaa
tcatcaggtaataaatcagccgcaggcgcgcaaatcatcgatgtgccaattacttcaaat
ttccgcgatggacttagtgttttggagtattttctttcaacttatggagctagaaaaggt
cttacagatacagcgcttaaaaccgcaaatgctggatatttaacgcgcaaactaatagat
gtggctcaaaatgtaaaggttacgatggaagattgtggcacgcatgaaggcgttgaagtt
agcgaacttaaaaatggtgaagagttagttgagagccttgaagatcgcattttaggacgc
gtgctaagtgatgatgtgattgatcctattacaaatgaggtgttatttacagaaggcacg
ctaataagcgaacaagcagcacgcaccattgtagattctggcattaaggctgtaacgatt
cgcacgcctattacttgtaaagcaccaaaaggtgtatgctctaaatgctatggaataaac
ttaggcgagggcaaattagtgcgtcctggcgaggctgtgggtataatcgcagcgcaatca
atcggcgagccaggcactcagctaacgctaagaacgatcaattcaggtgcagctgctact
aattttcaacaagaatttcaagttgtagccaaaaaagaaggtttcattcgttattataat
ttagaaatagatgaaagtaactttgtaataagtcgccgtaatgctgctattttgctagta
gagccaaaggtaaaagctccatttgatggtgtggtagatatagaaatttcccacgaagat
atcagcataataattcaaggcaaaaaagatgaattccgctacacatttagaaagcgaaat
ttagccgcctctaatgaattagccggcgttagcggtatgattgagggtaagtattatctg
ccatataaaaaaggcgataaggttaaagaaaatgaaagtatagttgaagtggtgcgcgaa
gattggtctgtgccaaatcgcataccttttgctagtgaaattaaagtagcaaatggcgat
cctgtaacgcaaaatattaaggcaaatgctgagggcttgcttaaattttatgttttaaag
ggtgattatttagagcgaaccaaaagcattaaaaaaggcgatgtggtagaagaaaaaggc
ttttttgttgtggttgctgatgatgaagatagagaagcagctcgccactacataccgcgc
caaagtgtaataaattttaatgatagcgatagggtaaataataacgatataatcgcaagc
cctaaaaaagatgaaaagctaattatagctcaatgggatccacatagcacggcatttaga
gcagctgaaagtggtaaggttaagtttgagtttatcagcacagaagaccacgagctaata
ccaaaagatcttaaaaaaggcgatgtgcgcgctgagttaatcaaagatatgggcgactca
aacacaggcacaaaaatccgcataagcgcaaatgctgaaatttcatcagataacgcaagt
gatgatggcaagatggtaatgctttctaattcgctcttgcgaactgctcaaagttctggc
acaaaagatagagattcaagagcgcaagctgctattgtgatagtaaatggctcaaaaagc
gtgaaatatccagtagaaaaagatgatattatcatcgtgcgcccagaccaagaaattaaa
aaaggtgatgtgatttttagccgtccaaaagctgtggctacttcaaaagatataaccgct
ggtttgccaaaagttagtgagctttttgaagctagaaagccaaaagataccgcctacatt
gctgaaatagacggcgttatagaaatagacacacacttaaaatccaaaactcgcattagc
attagcgcaagcgatggcacaagcattgattataatatagacaaaactcgccaaatttta
gtgcgcgatggagagtttgtgcatgttggtgaaaagctaacagatggcgtgatttcaagc
cacgatgtgcttagaattttaggcgaaaaagagttgcatagttatttgattcgcggtatc
caagatgtgtatcgctcagaaggcgttataatcagcgataagcacattgagattatcatt
tcacaaatgcttcgccaggtaaaaatagttgatagtggcgatacgcattttatagttggc
gacatgataagcagaagaaaattccgtgaagaaaactctaaaattcttcgtatgggtggc
gagccagccatagctgagcctatattgcttggcgttacgcgcgcatctattggttctgat
agcgtgatttcagctgcgtctttccaagaaaccacaaaggtgcttacagaagccagcatc
gctagcaagcgcgatttcttagaagatttaaaagaaaatgttattttaggtcgtatgatc
ccagttggcacggggttatataaagatgaagagcttaaattaaaagctaatgatgtagat
tga
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integrated database retrieval system
