Candidatus Campylobacter infans: CINF_1507
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Entry
CINF_1507 CDS
T07502
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
cinf
Candidatus Campylobacter infans
Pathway
cinf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cinf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CINF_1507 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cinf03021
]
CINF_1507 (rho)
03019 Messenger RNA biogenesis [BR:
cinf03019
]
CINF_1507 (rho)
Transcription machinery [BR:
cinf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CINF_1507 (rho)
Messenger RNA biogenesis [BR:
cinf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CINF_1507 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
AAA
AAA_25
Spore_III_AA
AAA_22
Mor
Motif
Other DBs
NCBI-ProteinID:
QLI05984
UniProt:
A0A7H9CP07
LinkDB
All DBs
Position
complement(1510417..1511745)
Genome browser
AA seq
442 aa
AA seq
DB search
MENPQNSGENNIRTKKQHMQTHTPVDGHTIEELRELDLERLIEIASSMDIENPREFRRQE
LVFEILRAQTKQGGYILFTGILEIVPDGFGFLRAMGSDLSDSQNDTYVSLSQIKKFALRV
GDIITGQVREPKEQEKYYALLKIEAINYKSINEAKQRPLFDNLTPIFPTEQLKLEYDPLR
LTGRVLDLFTPIGKGQRALIVAPPRTGKTELMKELAQGITRNHPEVQLIVLLIDERPEEV
TDMERSVKGEVFSSTFDMPAFNHVRVAELVIEKAKRMVETGRDVVILLDSITRLARAYNT
ATPSSGKVLSGGVDANALHKPKRFFGAARNIECGGSLTIVATALIDTGSRMDDVIFEEFK
GTGNSEMVLDRNISDRRIYPALNILKSGTRKDELLLKPENLAKIWAIRNVIATMDDVEAL
KFLYPKMQKTKNNEEFLNIINN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatccacaaaattctggtgaaaataatattcgcaccaaaaagcaacatatgcaa
actcacacgccagtagatgggcatactattgaagaattgcgagagcttgatttagagcgt
cttatagaaattgccagctctatggatatagaaaatccacgcgaattccgccgccaagag
ttggtttttgaaattttaagagctcaaaccaaacaaggcggatatattttatttactggt
attttggagattgtgcctgatggttttggctttttgcgagctatgggaagcgatttaagc
gatagccaaaatgatacttatgttagccttagccaaatcaaaaaatttgccttgcgcgta
ggcgatataatcaccggccaagtgcgcgaaccaaaagagcaagaaaaatattacgctctt
ttaaaaatagaagccataaattataaaagcataaatgaagctaagcaaagaccattattt
gataacctaacgcctatttttccaaccgagcagttaaaattagaatacgacccacttcgc
ctaacagggcgcgtgcttgatttattcacgcctattggcaaaggacagcgcgcattgata
gtagccccgccacgcacaggtaaaacagaattaatgaaagaactagcacaaggcattacc
cgcaatcacccagaagtgcaattaatcgtgcttttaatagacgagcgcccagaagaagta
accgatatggagcgtagcgtaaagggcgaggtgtttagctctacttttgatatgccagca
tttaatcatgtgcgcgtagccgaactagtaatagaaaaggcaaagcgtatggtagaaacc
gggcgcgatgtggtgattttgcttgatagcattacgcgtcttgcgcgtgcttataacacc
gcaacgccaagctcaggcaaggttttaagcggtggcgtggatgcaaacgcacttcacaaa
ccaaaacgcttttttggcgcagcaagaaatatagaatgtggcggttcgctaactatcgtg
gcaactgcacttatcgacacaggctcgcgaatggacgatgtgatatttgaagagtttaaa
ggcacgggcaatagcgaaatggtgcttgatagaaatatctcagatcgccgaatttaccca
gcacttaatatcttaaaatctggcactagaaaagatgaattgctactaaaacctgaaaat
ttagcaaaaatttgggctattcgcaatgtaatagctacaatggatgatgtagaagcgctt
aaatttttatacccaaaaatgcaaaaaactaaaaataatgaagaatttttaaatattata
aataattaa
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