Chelonus insularis: 118068065
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Entry
118068065 CDS
T08669
Name
(RefSeq) cleavage and polyadenylation specificity factor 73 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cins
Chelonus insularis
Pathway
cins03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cins00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118068065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cins03021
]
118068065
03019 Messenger RNA biogenesis [BR:
cins03019
]
118068065
Transcription machinery [BR:
cins03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118068065
Messenger RNA biogenesis [BR:
cins03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118068065
U7-dependent histone pre-mRNA processing factors
118068065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
DUF4457
Gp58
Motif
Other DBs
NCBI-GeneID:
118068065
NCBI-ProteinID:
XP_034941112
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MSVKRKAMDNQVPAEESDLLSIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDA
LPFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIK
VSNIATEQMLYTESDLEASMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGV
KILYTGDFSRQEDRHLMAAEIPNVHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNR
GGRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDK
IRRQIAINNPFVFKHISNLKGIDHFDDIGPCVVMASPGMMQSGLSRELFESWCTDSKNGV
IIAGYCVEGTLAKSILSEPEEITTMSGQKLPLKMTVDYISFSAHTDYQQTSEFIRILKPP
HVVLVHGEQNEMGRLKAALQREYEDDPNTMMEIHNPRNTFAVELYFRGEKTAKVMGTLAM
ETPKPGQILSGVLVKRNFNYHMLAPSDLPKYTDMNMSQVVQRQSIYFSGSLPVLRHLLTQ
IAGNLDLIDDKKMRVFKSIDVTVDGKIVTMEWIATPVNDMYADSVLTALLQAEMMETPPK
TLSAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDTKKAHIDLMSLEVICK
EDETFQQIVQTAVTKLHQSLAPPNDSI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaaaacgaaaagccatggataatcaagtgccggcagaggaaagtgacttattg
tcgattaagcctctaggagcgggacaagaggttggaaggtcctgtataatgttggagttc
aaagggaaaaaaatcatgcttgattgtggtattcatccaggattgtcaggcatggatgct
ttaccatttgttgatttagttgaagcagatgagattgatttattattaatatctcatttt
catttggatcattgtggagctttaccttggtttctacagaagacaagctttaaaggtcgt
tgttttatgactcatgcaacaaaagctatttatcgttggttgttatcagattacattaaa
gtaagtaatattgcaacagaacaaatgctttacactgagtctgatcttgaagctagtatg
gataaaattgaaaccatcaatttccatgaagaaaaagatgtatttggaatcaagttttgg
gcttataatgcaggtcatgtattaggagctgcaatgtttatgatagaaatagcaggagta
aaaattttatatactggagactttagtagacaagaggaccggcatttaatggcagctgaa
attccgaatgtccatcctgatgtattgatcacagagtcaacttatggaactcacatccat
gaaaaaagagaagatagagaaggaagatttacaaatttagttcatgaaattgtaaatcga
ggaggtagatgtttaattccagtatttgctcttggtagagctcaagagctacttttaatt
cttgatgaatattggagtcagcacccagagcttcatgaaattccaatctactatgcatct
tcgttagcaaagaaatgtatggcagtctatcaaacttatgttaatgcaatgaatgacaaa
attcgtcggcaaattgctataaataatccattcgtcttcaaacatatttcaaatctcaaa
ggaattgatcattttgatgatattggaccatgtgtagtgatggcatcacctggtatgatg
caaagtggtctatcgagagaactttttgaatcttggtgtacggattcaaagaacggagtg
ataattgctggttattgtgttgaagggacattagctaaatcaattttatctgaacctgaa
gaaattacaacaatgagtggtcaaaagttaccattaaaaatgactgttgactatatttct
ttctctgcacatactgattatcaacagacgtctgaatttattcgaattctgaaaccacct
catgtggtactagtccatggagaacaaaatgaaatgggtcgtctaaaagctgcgcttcaa
cgagagtatgaagatgatccaaatacaatgatggaaattcataatcctagaaataccttt
gctgtggaactttattttagaggagaaaagacagctaaagttatgggaacacttgcaatg
gaaactccaaaaccaggacaaattttatcaggagttctagtgaaacgaaactttaattat
catatgctggcaccatcagatctgcccaaatatactgatatgaatatgagtcaagttgtt
caacgacaaagcatttactttagtggatctcttccagttctacgacacctcctgacacag
attgctggaaatctagaccttattgacgacaaaaaaatgcgtgtctttaaaagcatagat
gtgactgttgacggcaaaattgttacaatggaatggatagcaactcccgttaatgatatg
tatgctgattctgtacttactgctttattgcaagcagaaatgatggaaactcctccaaaa
actttatccgcaccaacaaaaatggacagaatgcatttcaaggaatgcttgattgaaatg
cttcaggaaatgtttggagaagactcagtgccgaagatttttaaaggtgaaaaattatat
gttactgtagatactaaaaaagctcatattgatttgatgagtctcgaagtaatttgtaaa
gaagatgaaacctttcaacaaatagttcaaaccgcagttacaaaacttcatcaatccctg
gcaccaccaaatgactctatataa
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