Chelonus insularis: 118069159
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Entry
118069159 CDS
T08669
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
cins
Chelonus insularis
Brite
KEGG Orthology (KO) [BR:
cins00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cins03041
]
118069159
Enzymes [BR:
cins01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118069159
Spliceosome [BR:
cins03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118069159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
OB_NTP_bind
R3H
DEAD
Ank_2
AAA_19
Ank
HA2_N
nSTAND3
AAA_22
Ank_5
PhoH
Ank_3
ATPase
Ank_4
AAA_14
Sigma54_activat
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
118069159
NCBI-ProteinID:
XP_034942954
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MPRRRNKQAKLKIGEDTKIAVHLTIRKLLESPDQKELEFPSSYTCEERAYIHHMVVKLGL
KSKSRGKGANRFLTVYKREGSNIIQSDPLLQVQKSSKQCIYNLLQKFPLNNKERQDLLPP
TERERTIDNEVVTSAKAMGRLNNSIPQVPQLRTNQDVVQFRKSLPIYSSREKILQAISSY
QVVVIAGETGCGKTTQVPQYILEHCQQKNQVCRIICTQPRRLSAVSMAERVAFERDEKIG
QTFGYQIRLESRVAPKTILTYCTNGVLLRTLMGGDSALATITHIIVDEVHERDRFCDFLL
IALKEALVKYGPLKLILMSATMNSNIFVKYFNQCTSINISGRCFDVDVYYLQDILRMTGY
MTKKIATKKKELMNKKEKRKILESWTEFIPKPICSKNSKNKNTRPSPILGQQAEPVPEKV
ELEPWLQEEMDNSISDAWLHGGEDHFSQLLHLILSENISVDYQHSSTMVTPLMVAAGRGC
LNTTEQLLNLGANLNIRASNEWTALDWAVNMNQIECSELIQAYMKTYNCSVEDREVVQSG
DVSLSEDDKILLDIYHSTFNDDNVDYNLLLTLIVHIHTLMPPGSILVFLPGYDDIVMMKD
RILSEEKKMNTGLRYNLFVLHSNMQTCDQKRIFRPSPQGTRKIILSTNIAETSITIDDVV
YVIDCGKIKEKAFDALSGICSLKTNWISQACAKQRKGRAGRCQQGICYRLYSPVRFNSMQ
PNQTPEILRLPLQELCLFTKHLAPGNTPIAEFLDKALEPPSNMITRNAVQLLKSIDALNA
WEDLTELGTHLLDLPVEPRLGKMLLYAVVLKCLDPILTIVCSLAYKDPFILPHQPCQKRA
VSLVRKKFAADTYSDHMVVLRAFQGWQQARASGWERQFCEKHFISSAVMEMIVGMRTQML
GQLRASGFVRARGSGDIRDLNQNSENWAVVKAALTAGLYPNLIRVDKECGQLRSQKESKI
LFHPSSTLRDFSKSSKTNLSQLHSACVKSLPSDWLVYEEMSRCGRFCHAKTVTLVNPMTI
ALFSGPARLPMDVIYEAESIPESESDSEVEESREGITFLKLDDWISFKLDYETVQLVLHL
RQKWNALFLRRMKTPNRTMSQLDELVIKTIVNVITNEEQACDLQQPSGIGQRPRPLIVDF
YPANTRRSDDSEDAN
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgccacggcgtagaaacaagcaggcgaagttaaaaattggtgaagacactaaaatagct
gtgcatttaacgataaggaaattattggagtctccagatcaaaaagaattggaatttcca
tcatcatatacatgtgaagaacgagcatacatacatcatatggttgtaaaacttggattg
aagtcaaaaagcagaggaaaaggagcaaatcgttttctcactgtatataaaagagaagga
tcaaatataattcaatctgatccattattacaagttcagaagtcttcaaaacaatgcatt
tataatttacttcaaaaatttcctctcaataataaagaacgtcaagatctgcttcctcca
acagaacgtgaaagaactatagacaatgaagtagttacgagtgcaaaagcaatgggtcga
ttgaataatagtatacctcaagttcctcaattacgaacaaatcaagacgtagtacaattc
cgtaagtctttaccaatttatagtagtcgagaaaaaatacttcaggcaatatcttcatat
caagtagtcgttattgctggagaaactggctgtggaaaaactactcaagttccacaatac
atacttgaacactgtcagcaaaaaaatcaagtttgtcgaattatttgtactcaaccacga
agattatcagctgtttcaatggctgagagggtggcctttgaaagagatgaaaaaattggc
caaacttttggttatcaaatacgattagaaagtagagttgctccaaaaactatactaaca
tattgtactaatggagttttattgcgcactctaatgggtggtgattctgctttagcaaca
ataactcatattatagtggatgaagtccatgaacgtgatagattttgtgattttcttcta
atcgctttaaaagaagctttagttaagtacggacctctaaaattaattctaatgagtgcg
actatgaattcaaatatatttgttaaatactttaatcaatgtacatcaattaacatatct
ggaagatgtttcgatgttgatgtttattatcttcaagatattttaaggatgacaggttac
atgacaaaaaaaatagctactaaaaaaaaggagttgatgaataaaaaagaaaaacgaaaa
attttagaatcttggactgagttcatacctaaaccaatttgcagcaaaaattctaaaaat
aagaatacacgaccatcaccaatattaggtcaacaggctgaaccagtacctgaaaaggtc
gagcttgaaccatggctacaagaagaaatggataatagtatttctgatgcctggttacac
ggtggagaagatcacttttctcaacttcttcatttaattctttctgaaaatatctcagta
gattatcaacattctagcactatggttacacctttaatggttgctgctggacgaggatgt
ttaaatactactgaacaacttttaaatcttggagctaatttaaatattcgagctagtaat
gaatggacagcacttgattgggctgtcaacatgaaccaaattgagtgttctgaattaatt
caagcatatatgaaaacttacaactgctctgtagaagaccgagaagttgttcaatctgga
gatgtttctttgtcagaagatgataaaatacttttagatatttatcatagtacatttaat
gatgataatgttgactacaacttgttacttactctaattgttcacattcatacactgatg
ccacctggatctatacttgtatttttacctggttatgatgacatcgtcatgatgaaagac
agaatactttcagaagaaaagaaaatgaatactggattgagatataatttatttgttctt
cattcaaatatgcaaacgtgtgatcaaaagcgaatattccggccaagtccccaaggaaca
agaaaaataattttatcaacgaatatcgctgaaactagtattactattgacgatgttgtc
tacgttattgattgcgggaaaatcaaagaaaaagcttttgatgcactttcaggaatatgc
agtttaaaaactaattggatatctcaagcatgtgcaaaacaacgaaaaggaagagccggc
agatgtcaacaaggaatatgctatcgtttatattcaccagtgcgtttcaatagtatgcaa
cccaatcagacaccagaaatcttacgactacctctacaagagctgtgcttatttactaaa
catttggctccaggcaatactccaatcgctgaatttttagataaagcattagaacctcct
tccaatatgataactagaaatgctgtacaattattgaaatctattgacgctttaaacgct
tgggaagacttaactgagcttggcacacatcttttagatcttccagtagaaccaagacta
ggaaaaatgttactttatgctgtggttctcaagtgtcttgatccaattttaactatagtt
tgtagtttggcctataaagatccatttattcttcctcatcaaccctgtcaaaagcgtgca
gtatctctggtgaggaaaaaattcgctgcagatacttattctgatcatatggtagtattg
agagctttccaaggttggcaacaagcacgcgcaagtggctgggaacgtcaattttgtgaa
aaacattttatctcctcagcagttatggaaatgatagttggaatgaggactcagatgctt
ggacagttgcgagcgtcaggttttgtgcgtgctagagggtcaggtgatattagagaccta
aatcaaaattcagaaaattgggctgtggttaaagccgctctaactgctggcctctatccg
aatttaatccgagtagacaaagaatgtggtcaattacggtcgcaaaaagaatctaagata
ttatttcatccttcatcaacgttgagagatttttcaaaatcatccaaaactaatttatca
caattacacagtgcctgtgttaaatctttaccttctgattggttagtttatgaggaaatg
agtcgatgtggaagattttgtcatgctaaaactgttactctagtcaatcctatgactatt
gcgctatttagtggacctgctagattaccaatggatgtaatctacgaagcagaatcaata
ccagaaagtgaatctgattctgaagtagaagaaagtcgagaaggtattacctttttgaag
cttgatgactggatttcttttaaactagattacgaaacagtccagttggttctgcatcta
cgtcaaaagtggaatgcattatttttgagacgaatgaaaactcctaaccgaacaatgtct
caattagatgaacttgtgataaagacgattgtcaatgtgattactaacgaagagcaagca
tgtgatcttcagcaaccgtccggtattggtcaacgtccacggccacttatcgttgacttt
tatccagcaaatacaagaaggtcagacgatagtgaagatgcaaattaa
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