Chelonus insularis: 118070792
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Entry
118070792 CDS
T08669
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
cins
Chelonus insularis
Pathway
cins03013
Nucleocytoplasmic transport
cins03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cins00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118070792
03015 mRNA surveillance pathway
118070792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cins03019
]
118070792
Enzymes [BR:
cins01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
118070792
5.6.2.5 RNA 5'-3' helicase
118070792
Messenger RNA biogenesis [BR:
cins03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118070792
mRNA cycle factors
Common to processing body (P body) and stress granule
118070792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
SLFN-g3_helicase
UvrD-helicase
DEAD
Helicase_RecD
ATPase
NPHP3_N
SRP54
nSTAND3
AAA_16
AAA_22
AAA_10
AAA
AAA_32
AAA_7
Motif
Other DBs
NCBI-GeneID:
118070792
NCBI-ProteinID:
XP_034945496
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQASQHDVVQNPQSQ
NVQINGTNGSSALDLKISGAAQNLAELQFEEEEEEAYYNRDLPEHACKYCGIHEASCVVM
CNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCAVRNVFVLGF
IPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLAWLVKIPSEQEQLRARQ
ISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADY
DKRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKVMHGDELRLRYLGELHKLWSG
IGHVIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTS
VSAYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGT
GKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVIRLCAKSREAIDSPV
SFLALHNQIKNMETNTELQKLQQLKDETGELSSADEKRYRLLKKAAEKELLEAADVICCT
CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMYKKAA
RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID
FPWPVPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPY
EGQRAYLVQYMQYQGSLHQKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP
RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLNFYKEQKVLVEGPLNNLKESMIQFAKP
KKLVNSANPGSHFMSTSMYDAREALIPGSVYDRSGNQINGNQNHNPYYQRNVPLDMFSRT
HDTISYISPERAQAAMNNVPVPVGMFMNMAHVPPRFYNQHQQALAARQNQRSRRQTGIKK
VTPRLGKFSQSEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAELSQDSFAVGDF
QSQMDGLLSQDSNYHADRSGFYQGGQSQPGGQFSQPY
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgatgcttatggacccagcagtcaaactttaacatttttggatactgaagaa
gctgatttaatcggtgctgatacgcaaggaagtgaattcgatttcactgactttacttta
ccatctccaagtcaaactcaagcttcacaacatgatgtggtacaaaacccacaaagtcaa
aatgttcagattaatggtactaatggaagctctgcgttagacctaaaaatatctggagca
gcacaaaatttagctgagcttcagtttgaagaagaagaagaggaagcttattacaatcgt
gatttacccgaacatgcatgcaagtattgcggtatccatgaagcatcttgtgttgttatg
tgtaatgtatgcagaaaatggttctgcaacggacgaggaaatacttctggatctcatatc
atcaatcatttagtaagagctaaacacaaggaagtgacattgcacagagacggacccttg
ggtgaaactgtcctggaatgttactcttgtgctgttagaaatgttttcgttcttggattc
attccagcaaaagctgattccgtggttgtgttgctctgtagacagccatgtgctgctcaa
agctcactgaaagacatgaattgggatcaagaacaatggaaacctttgatagaagatcgt
agttttcttgcatggcttgtaaaaattccatctgagcaagagcaacttcgtgctcgtcaa
atttctgcacaacaaataaacaagcttgaagaattatggcgtgataatgttgatgctacg
tttcaagatctagaaaagcctggtgtggatgaagaacctcagcaagttttactgcgctat
gaagacggttatcaatatcagaatatttttggaccactagtgaagcttgaagctgattac
gataaacgcttgaaagaatctcaaacgcaagaaaatatcgaagtacgttgggatgttggt
ttaaataaaaaaacaatcgcatatttcatgctggcaaaaactgacggagatatgaaagta
atgcacggcgatgaattaagacttcgatatcttggagagttgcataaactttggtctggt
atcggtcatgtcataaagattccagataactatggtgaagaagttggaattgagttaaaa
aataactctggtgctccaactgagtgtgtaagtaattttgtggtggatttcatttggaaa
agtacaagttttgatcgtatgcaactggcattgagaaaatttgccgttgacgatacatca
gtatcagcttatatctatcatcgtttactgggtcatgaagttgaagaagttttattccgc
tgtcatttacctaaacacttcagtgctccaaatcttccagatttaaatcgatctcaagtt
tatgcagttaaacatgcaattcaaagaccactatctttaattcaaggacctcctggaact
ggtaaaactgtaacaagtgctacgatcgtttatcagttagtaaagcaaaatggtggtcca
gttttagtatgcgcaccatcgaatactgcagtagatcaattgacagaaaaaatccataag
tcgaatttaaaagttataagactctgtgctaaatctagagaagctatagattcaccagta
agtttcttagcacttcacaatcaaataaagaatatggaaaccaatacagaacttcaaaaa
cttcaacaattgaaagatgaaacgggtgaactgtcatccgccgatgaaaagagatacaga
ttattgaagaaggctgcggaaaaagaacttttagaagcagctgatgttatttgttgcacc
tgtgttggtgccggtgatccaagactacatagattaaaattccattctatcttaatcgat
gaaagcatgcaagcaactgagccagaatgcatggtaccagttgttttgggtgctaaacaa
ttaattttagttggagatcactgccaattagggccagttgttatgtataaaaaagcagca
agagctggattatctcaatcgttgtttgaaaggcttgttgtattgggaataagaccattt
aggctagaagttcaatatagaatgcatcctgatttatcaagattcccttcaaatttcttt
tacgaaggttctctacaaaatggtgtttgcgctgatgaacgcaaattattgaaaattgat
ttcccatggcctgtacctgataaacctatgttcttttatgttactcaaggccaagaggaa
attgcaggtagtggaacttcgtatttaaatagaacagaagcatcgaacgttgaaaaaata
accacaagattccttagatgtggggtaaaaccagaacagatcggagttattactccatat
gaaggccaaagggcttatttagtacaatatatgcaatatcaaggatctcttcatcagaaa
ttatatcaagaaatagaagttgcaagtgttgacgcttttcagggtagagaaaaggatata
ataataatgtcttgtgtacgatctaatgaacatcaaggtattggatttttaaatgaccca
aggcgattgaatgtagcattgacacgtgctaaatacggaattattattgttggaaatccg
aaagttctgtctaagcaacctctttggaatcatttgctaaatttctataaagaacagaaa
gttttggttgaaggtccattaaataatttgaaagagtcaatgattcagtttgcaaaaccg
aaaaaattagttaactcagctaatcctggatcacacttcatgtctacgtctatgtatgat
gctcgagaagctcttatacctggatctgtttatgatagatcagggaaccaaataaatggc
aatcagaatcataatccttattatcaaagaaacgttcctttagatatgtttagcagaact
catgatactattagctatatcagtcccgaaagggctcaagctgcaatgaataatgttcct
gtacctgtagggatgtttatgaatatggcacacgttcctccacgattctacaatcaacac
cagcaagctctagctgctagacaaaatcagagaagtcgaagacaaactggaattaaaaag
gtaacacccagattgggtaagtttagtcagtcggagcaaaacacacaaccttatagccaa
ccagggttacctttgactcaaggaactacccaaggtatgtctcaaccaggctttagttta
tctcagccaggattgagtcaagcagaattatctcaagattcatttgctgttggtgatttc
caatcccaaatggatggattattatcacaagattcgaattatcatgccgatcgaagcgga
ttttatcaaggaggacaatcacaacctggaggacaattttcccaaccctactga
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integrated database retrieval system
