Chelonus insularis: 118070940
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Entry
118070940 CDS
T08669
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
cins
Chelonus insularis
Pathway
cins04382
Cornified envelope formation
cins04512
ECM-receptor interaction
cins04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cins00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118070940
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118070940
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118070940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cins04147
]
118070940
00536 Glycosaminoglycan binding proteins [BR:
cins00536
]
118070940
Exosome [BR:
cins04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118070940
Glycosaminoglycan binding proteins [BR:
cins00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118070940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118070940
NCBI-ProteinID:
XP_034945726
LinkDB
All DBs
Position
Unknown
AA seq
1841 aa
AA seq
DB search
MCLRRDVISSCSIIKRYLLTPVTCVLLLLIVISSSQPSHAVVCKSYACNCTGIKGTPGFP
GIAGPQGPEGIPGDIGPDGPPGPKGEKGDEGEYGGTGEKGYRGDDGIQGFQGEPGLSGHP
GIAGVRGPDGLDGCNGTDGRAGVPGIPGAYGPRGFPGPDGDPGPTGEPGDGGINSVGAKG
DRGEPGVDGLEGYTGSYGIPGDMGYPGETGDMGFTGPRGLPGPRGDQGETVYGVKGQIGE
PGDRGEPGPYIPEWRKKDDTIPVKGPQGPKGIRGDWGDRGRKGELGDKGPMGRPGYAGVK
GIKGEQGDDGPRGKQGVQGPPGAAGEKGEKGAPGYAGSPGEDGWDGEPGELGNQGPPGKQ
GAPGEKGAYIPELDEIIAGSIGPQGDLGPPGEPGRAGTPGKPGLVGYIGPPGPPGPRGPP
GTPGLKGSSVKGEQGDDGLPGNLGPQGPPGRPGLPGLPGAKGFPGITIIGPQGPDGYPGI
DATPGLPGDRGDPGPPGEKGFPGKGVRIQGPRGEDGLPGTPGQPGPDAWPGFPGAKGVKG
QRGDDCGVCSPGLPGEKGEPGDSGLNGYPGAPGFPGLPGPRGFKGQHGRPGTVGPMGLEG
DSGRPGIAGPQGPKGEVGQIIWPPKEKIFIPPGDIGDKGYPGFEGLRGIRGPPGEIGDPG
PGGPKGDKGEFGLPGPPGRDGRPGFNGLPGEKGEDADVPVEFLRGDPGLDGIPGPKGVRG
ETGLPGEQGESAEYDINLKGDKGFKGERGDPGYDGLKGWPGPTGDEGWPGAPGLQGSPGI
SLQGAPGLKGYAGIPGDQGPRGSAGKPGPTGPPGFAGAPGTKGDRGDMGTNLLYGEIGER
GRKGEKGDYGEEGPQGRRGNPGDGGPKGNKGAKGAPGFEGLPGLEGAKGVRGDSIQGPRG
YPGSPGLPGSPGMLGNIGLSGADGPPGYEGMKGLKGEIGNIGRRGEDGDIGPQGYPGMFG
MPGLPGRPGEEGDDGEIGEPGPPGWPGLDGIPGLPGFKGERGDIGFPGVSGPVGPPGLPG
IAGDVGYDGLPGEPGENAFSGPQGDMGEPGFMGEVGIPGRPGFDGRPGLPGEPGLDSTGF
DGLTGPKGEPGWNGIDGRPGPKGEIGDIGPDGFKGERGDDGAPGRSGAPGIPGRTGEKGE
RGQMGVAGFDGLKGKRGFDGDPGSMGRPGNPGDPGPRGFPGLPGLHGPKGEVGDIGLTPY
AEATKGEVGDIGFHGLRGRKGEQGDMGSPGYPGRKGVRGDDGYPGPDGFPGLEGLPGLPG
DRGLPGAPGLPGQFAERGEPGMAGLDGQPGIPGRPGQKGAPGEYGPDGPKGIQGDAGRSI
PGPKGEKGNLGPRGFEGRPGAPGLPGLPGFPGPDGPKGFRGEIGYARYAPKGEQGDIGYP
GRDGRHGAKGEIGDSGRPGLPGYPGLKGERGIPGEPGLPGVQGPEGPQGPKGDPGINPYP
PFPRKGPIGDPGLPGLPGYPGTPGVMGMPGLDGLPGLEGERGENGLPGLPGPDGQDGLPG
RQGARGEIGRQGAPGYAGIRGDDALPAPPPRSRGFHFARHSQTEMIPLCPRGTTKLWDGF
SLLHIMGNGHPWGQDLGSPGSCVMKFSTMPFLFCNLNNVCDYAQRNDYSYWLSSTEPMPM
MMTPIPAPEAGRYISRCSVCEASTRMIAVHSQSMTIPECPGGWDEAWIGYSFLMHRDSGS
AGGGQSLISPGSCLEEFRTRPFIECRGLGTCNYFSTAISYWLATIENHEMFRKPQQQTLK
ADHTSRVSRCAVCIRRQITENNNSRLRPFTSHGTSHVPPPERERYPPTINNSQPIQRTPP
DWQQRRRQPIRDSRITSGRVPPQYRRRGRIRKPEQSNEVIY
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctaaggagagatgtcatctcgtcctgcagcatcatcaaacgatatcttctaaca
ccggttacctgtgtgcttctactcctcattgttatttcatcttctcaaccttctcatgct
gtggtgtgtaaatcatatgcatgtaattgtacgggaatcaaaggaaccccaggatttcct
ggaatagcagggcctcagggtccggaaggaattcctggggacattggtccagacgggcca
ccaggaccgaaaggggaaaaaggagacgaaggagagtatggaggaactggagaaaaagga
tatcgaggagatgatggaatacaagggtttcaaggagaaccaggtctatcaggtcatcca
ggtattgctggagttcgaggaccagatggactagatggttgtaatggaactgatggacga
gctggtgtaccaggtataccaggagcttatggaccaagaggttttcctggacctgatgga
gatccaggtcctactggagaacctggagatggtggaatcaattctgttggtgcaaaaggt
gaccgtggtgaaccaggagttgatggtcttgagggatacacaggaagctatggaattcct
ggagatatgggatatcctggtgagacaggagacatgggatttactggtccacgtggtcta
ccaggacctcgtggagatcaaggtgaaacagtttatggtgtaaaaggtcagattggtgag
ccaggagatcgaggagaacccggtccctacattcctgaatggagaaaaaaagacgatacg
attcctgtgaaaggtccacaaggaccgaaaggtattcgcggtgactggggagatcgcgga
aggaaaggtgaacttggggataaaggaccgatgggacgacctggatatgcgggagtaaaa
ggtataaaaggagaacaaggagatgatggtccaagaggaaaacagggtgttcaaggtcct
cccggagctgctggtgaaaaaggagaaaaaggagcgcctggatatgcaggaagtcctgga
gaagatggatgggatggagaaccaggagaacttggaaatcaaggacctccggggaaacaa
ggagccccaggagaaaagggtgcatatatccctgaactcgatgaaatcattgctggttca
ataggtcctcaaggagatttaggtccacctggtgaacctggtagagccggaactcctgga
aagcctggattagtgggttatatcggaccacctggacctcctggaccacgaggtcctcct
ggtactccagggcttaaaggatcatctgtgaagggagaacaaggagatgacggtctgcct
ggaaatttgggtcctcagggccctcctggaagacctggtttacctggtttgccaggagcg
aaaggattcccaggtattaccattattggacctcaaggacctgatggatatccgggaata
gatgctacaccgggtctaccaggagatcgtggagatcctggtcccccaggtgaaaaaggt
tttcctggtaaaggagtaaggattcaaggacctcgaggtgaagatggtttaccgggtact
cctggtcaacctggacctgatgcctggcctggtttcccaggtgcaaagggtgtaaaagga
caacgcggtgatgattgtggagtatgctcaccaggtttaccgggagaaaaaggtgaacca
ggtgattctggtttaaacggatatcctggagctccaggattccctggtttaccaggacca
cgaggatttaagggacaacatggaagacctggtactgtaggtccaatgggtctagaagga
gacagtggacgtccaggaattgcgggaccacaaggaccaaaaggagaagttggtcaaatt
atttggccgccgaaagaaaaaatttttattcctcctggtgatattggagataaaggatac
ccaggatttgaaggtcttcgaggaatacgtggaccaccaggagaaatcggtgatccagga
cctggaggacctaaaggagacaaaggtgaatttggattacctggacctccaggaagagat
ggtcgaccaggattcaatggtttacctggagaaaaaggagaagatgccgatgtaccagtt
gaatttcttcgtggagatcctggattagatggtataccaggccctaaaggtgtacgagga
gaaacaggtttacctggagaacaaggagaatctgctgaatacgatattaatcttaaaggt
gataaaggattcaaaggagaacgaggagatcctggctatgatggactcaaaggctggcct
ggtcctactggagatgaaggttggcctggtgctccagggctacaaggctctcctggtata
tctttacaaggtgcaccaggattgaaaggatatgctggaatacctggtgatcaagggcct
cgtggttctgccggaaaaccaggacctacaggtccaccaggctttgctggtgccccaggc
acaaaaggagatcgaggagatatgggaacgaatctattatacggagaaatcggagagcgt
ggtagaaaaggtgaaaaaggtgactacggagaagaaggacctcaaggacgtagaggaaat
cctggtgatggtggtcccaagggaaataaaggagctaaaggcgcacctggttttgaagga
cttccgggacttgaaggtgcaaaaggagttcgaggtgattccattcaaggacctcgtggc
tatcccggaagtccaggtcttcctggaagtcctggaatgcttggtaatattggacttagt
ggtgctgatggacctcctggatatgaaggaatgaaaggattgaaaggagaaattggaaat
attggtcgtcgaggtgaagatggtgatattggacctcaagggtaccctggaatgtttgga
atgcctggactgccagggcgtcccggtgaagaaggtgatgacggagaaattggtgaacct
ggtccacctggttggccaggattagatggtattcctggactaccaggttttaaaggagaa
agaggagatattggatttccaggcgtatcaggtcctgttggacctccaggattacctgga
atagcaggagacgtcggttacgatggattaccaggagaaccgggtgaaaatgcttttagt
ggtcctcaaggagatatgggagaacctggatttatgggagaagtaggaataccaggaaga
ccaggttttgatggacgacctggacttcctggagagcctggattagattctactggattt
gatggcttaactgggccaaaaggtgaacctggttggaatggaatcgatggaagaccaggt
ccaaagggagaaataggagatatcggacctgatggatttaaaggggaacgaggtgatgat
ggtgctcctggtagatcaggtgctccgggtatacctggaagaacaggagaaaaaggagag
cgagggcaaatgggtgtagctggctttgatgggcttaaaggaaaacgtggatttgatgga
gacccaggatccatgggtcgaccaggtaatccgggagatccaggtccacgtggattccct
ggtcttcctggacttcatgggcctaaaggagaagtgggtgacattggattaactccgtac
gctgaagctactaaaggggaagttggtgatattggttttcatggattacgtggaagaaaa
ggagaacaaggtgatatgggatcacctggttatccaggtcgtaagggagttcgtggtgat
gatggatatcctggccccgatggatttcctggattggaaggattaccagggttgcctggt
gaccggggattgcctggggctccaggtttaccaggacaatttgctgaacgtggagaacca
ggtatggcaggtcttgatggacaaccaggaattccaggacgaccaggacaaaaaggagca
cctggtgaatatggtcctgatggaccaaaaggtattcaaggcgatgcaggcagaagtatt
cctggaccaaaaggtgaaaaaggaaatttaggaccacgtggatttgaaggtcgtccagga
gcaccaggtttacctggcttaccagggttccctggacctgatggtccaaaaggttttaga
ggagaaataggttatgcacgttatgctccgaaaggtgaacaaggagatattggttaccct
ggacgtgatggtcgacatggagctaaaggagaaattggtgattctggaagaccaggatta
cctggataccctggcttaaagggagagagaggaattccaggagaaccagggttacctgga
gtacaaggacctgaaggacctcaaggacctaaaggagatccaggaatcaatccttaccca
ccattcccgcgaaaaggacccattggtgatcctggtctacccggtttaccaggataccct
ggaacaccaggagtcatgggaatgccaggtttagatggattacctggtcttgaaggagaa
agaggagaaaatggtttaccaggacttccaggtcctgatggacaagatggtttacctgga
cgtcaaggagcacgtggagaaataggtcgccagggagcaccagggtatgctggaataaga
ggagatgatgctttacctgctccacctccaagaagtcgtggtttccactttgccagacat
tcacaaacagaaatgattccactctgcccacgagggacaaccaaattatgggatggattc
tccctgttgcacattatgggtaatggtcatccttggggacaagatttaggttccccgggc
agttgtgtcatgaaattctctacaatgcctttcctattctgcaatttaaataatgtttgc
gattacgctcaacgtaacgattatagctattggctaagttcaacagagccaatgccaatg
atgatgactccgattcctgcacccgaagctggaagatatatatctagatgttcagtttgt
gaagcttcaactagaatgattgcagtacacagtcaatccatgacaatacctgagtgtcct
ggaggctgggatgaagcgtggattggttacagttttctaatgcatcgtgattctggatca
gctggtggtggacaatcattaatttctccaggatcatgtcttgaagaattccgtactcga
ccatttattgaatgccgtggtttgggtacttgtaattacttctcaactgcaatatcttac
tggctagcaacaatcgagaatcatgagatgtttagaaaacctcaacaacagactcttaag
gccgatcatacatcgagagttagtagatgtgctgtctgtattcgacggcaaatcacagaa
aacaataatagtagacttagaccattcacatcacatggaacaagtcatgtacctccaccg
gaacgtgagaggtatccaccgacgataaataattctcagccaattcaacgtacaccacct
gattggcagcaacgccgacgacaaccgataagagatagtagaattacctcaggtcgtgtt
cctcctcaataccgtaggagaggtcgaatacgtaagccagaacaatcaaatgaagtcata
tattaa
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