Chelonus insularis: 118072804
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Entry
118072804 CDS
T08669
Name
(RefSeq) uncharacterized protein LOC118072804
KO
K03679
exosome complex component RRP4
Organism
cins
Chelonus insularis
Pathway
cins03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cins00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118072804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cins03019
]
118072804
Messenger RNA biogenesis [BR:
cins03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118072804
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
118072804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
Isochorismatase
ECR1_N
KH_6
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
EF-hand_8
EH
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
118072804
NCBI-ProteinID:
XP_034948815
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MDKIPEIEIRLAVDRTEMNFLARDNIHQKIYTPGEKITTQSDYLRGHGTYVDEDERLRAS
VAGVLEKVNKLISVRPLKARYQGEIGDVVVGRITEVRQSRWKVDTNCKLDSVLLLSSINL
PGGELRRRSAEDEQTMRRYLQEGDLICAEVQSSYQDGSLSLHTRVLKYGKLSQGIMIKVP
PALIKRKKTHFHHLTNGATLILGNNGYVWVGASSSSTDRSEGGFTQDLSQVSDEDLEICA
RLRNCILILAKFNILLTDTSVTYAYEESTKYKAFELLQPEVMVDVALMTHHRLNQKREEK
CFIMSLPVDMDACFTAFDRDADGFLSIDEFELICRALFRNDRGKVYNIEENQLKEIFDIF
DTKNDGFLDREEFEVCWNRWIKICTRPKSAFLIVDVQNDFISGSLNIKNCAAQHDGSEVI
EPINRLLDTVTFDAVFYSLDWHPVDHVSFIDNLHLREVDESSPISKDDAKVYDTVTFKGP
PLLKQRLWPRHCVQDSWGAELHKDLKVIDKAIKIYKGTNPDVDSYSVFWDNKKLTETTLS
SQLQDKGATDIYVCGLAYDVCVGATAFDALTSGYRTILIDDCSRGVDLVDIEKTKSSVIA
SNGVIVNSSQVKAMVEGRDRRPELGYKLACEIKKSLKKMNIDNKY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggataaaattcctgaaattgaaatacgactcgcagtcgatcgtactgaaatgaatttt
ctcgcacgagataatattcaccagaaaatttatactcccggcgaaaaaattaccactcag
tcagactatttaagaggtcatggaacatatgtggatgaagatgagcgtttaagagcatca
gtagctggagttttagagaaagttaataaattaatatctgtaagacctcttaaagccaga
tatcaaggagaaataggggatgtagttgttggtaggattactgaagttcgacaaagtcga
tggaaagtggatacaaactgcaaattggattcagttttattattatctagtattaacctc
cctggaggagagctgagacgaaggtcagcagaagatgaacagacaatgcgtcgttattta
caagaaggtgatctaatatgtgcagaagtgcaaagttcatatcaagatggatctctatct
cttcatacacgcgttctaaaatatggaaaattgtctcaaggaatcatgatcaaagttcca
ccagctttgatcaaaagaaagaaaactcattttcatcatctgaccaatggtgcaacactt
atactaggaaataatggctatgtatgggttggagcttctagtagtagtactgatcgatcg
gaaggtggattcacgcaggacttgagtcaagtgtctgatgaagatttagaaatttgcgca
aggttgcgaaattgtatcttaattttagctaagtttaatattcttttaacagacacttct
gtcacttatgcatacgaagagtctactaaatacaaagcttttgagttattacagccagaa
gttatggttgatgtggcacttatgacgcatcatcggttgaatcaaaaacgtgaagaaaag
tgttttataatgtctttaccagtcgacatggatgcttgttttactgcattcgatagggat
gctgatggctttctatcgattgacgaatttgaattaatatgccgggcactctttcggaat
gatcgaggcaaagtttataacatagaagaaaatcaattaaaagagatcttcgatattttt
gataccaaaaatgatggatttctggatcgagaagaatttgaggtatgttggaaccggtgg
ataaaaatatgtacaaggcctaaaagtgctttcctcattgttgatgttcaaaacgacttt
atatcaggatcgctgaatataaagaattgtgctgctcaacatgacggttcagaagtaatt
gaaccaataaatcggttacttgataccgtgactttcgatgctgtcttctattccctggac
tggcaccctgttgatcacgtttctttcattgataatttgcacttgagagaagtggatgag
tcaagtccaatatcaaaagatgatgctaaagtatacgacacagtgacatttaaaggtcct
ccactattgaaacaacgtctgtggcctcgtcattgtgttcaagattcctggggagctgag
cttcataaagatttaaaagttattgataaagctattaaaatttataaaggtactaatcca
gacgttgactcctattctgtcttctgggataataaaaaattgactgaaactactttgtct
tcgcaacttcaagataaaggagctactgacatttacgtttgcggacttgcatatgatgtt
tgcgtaggtgctactgcttttgatgctttaaccagtggatatcgtactattctcattgat
gattgcagtcggggggttgatttagttgacattgaaaaaacaaaatcgtcagttattgct
agtaatggtgttattgttaattcaagtcaggtaaaagctatggttgagggtagagatagg
agaccagaacttggatataagcttgcctgtgaaataaaaaagtctctcaaaaaaatgaat
atagacaacaaatattga
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