Chelonus insularis: 118074103
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Entry
118074103 CDS
T08669
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
cins
Chelonus insularis
Pathway
cins03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cins00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118074103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cins03019
]
118074103
03041 Spliceosome [BR:
cins03041
]
118074103
Messenger RNA biogenesis [BR:
cins03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118074103
Spliceosome [BR:
cins03041
]
Complex B
Other components
Prp19-related factors
118074103
Complex C
118074103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
TPR_12
TPR_8
TPR_2
NRDE-2
PPR
ARM_TT21_C
DHR-2_Lobe_A
SNAP
DALR_1
TPR_10
Motif
Other DBs
NCBI-GeneID:
118074103
NCBI-ProteinID:
XP_034950910
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MPQKVDSEGNVYVFNDEDLPYEEEILRNPYSVKHWARYIDHLKNTKSPNINIVFERALKE
LPGSYKLWYNYLCHRVNQVKNRRIDDPLYEDVNNAFERALVFMHKMPRIWIDYCSFMTKQ
CFITRTRHIFDRALRALPITQHHRIWPLYLDFVKSHNISETGIRVFRRYLKLAPEDTEDY
IEYLISIDRLDEAAIKLAQIVNQDDFVSKHGKSNHQLWSELCDLISKNPTKIKSLKVDAI
IRGGLRRYTDQVGSLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYSHFE
ELITDKRMEEVSNNPNSDEDDDIELELRLARLEHLMERRPLLLNSVLLRQNPHNVQEWHK
RVKLYEGQPHEIINTYTEAVQTVQPHLAVDKLHTLWVAFAKFYEENDQISDARVVFEKAT
HVPYTKVDDLASVWCEWAEMEIRHGNCIEALKLMHRATAIPSRRVAYYDETETVQTRLYK
SLKVWSMYADLEESFGTFRTCKAVYDNIINLKIATPQIIINYGLFLEENNYFEEAFRAYE
NGIALFKWPNVYDIWNTYLTKFLKRYGGSKLERTRDLFEQCLEHCPPKYAKVFYLLYAKL
EEEHGLAKHAMKVYERATNAVPNEERFEMFNIYIKKAAEIYGVPKTREIYKEAIEVLNDE
NSREMSLRFAEMETKLGEVDRARAIYVHCSEICDPRVTSHFWQVWKEFEVRHGNEDTMRE
MLRIKRSVQAMYNTQVNMMSAQMLSNVNISQTSDTPVDAMKMLDSKAGADTNTSVTARGA
ISFVRGVTEGGAANNNAKVSNPDEINIDTDDTDNEEEGEEDVEEEDVPVKKRKIPSEVFG
GLKSNDDEGE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagttgattcggaggggaacgtatatgtttttaatgatgaggatttacct
tacgaagaagaaattctacgtaacccctattctgtgaaacactgggctcgatacattgat
cacttaaagaatacaaaaagtcccaacatcaacatcgtcttcgagagagctcttaaagag
cttccaggtagttacaaattatggtacaattatttatgccatcgagtaaatcaagtaaaa
aatcgtcgcattgatgatcctctgtacgaagatgttaacaatgcatttgaacgtgctctt
gtttttatgcataaaatgcctagaatatggatagattattgttcatttatgacaaaacaa
tgttttataacgagaactaggcatatttttgatagagctttgagagctcttcccattact
cagcatcatcggatatggccgctttatttggactttgttaaaagccataatatttcagaa
acaggaattcgtgtattccgtaggtatttgaagctcgctccagaagatacagaagattac
attgaatatctgatctccatagaccgccttgatgaagctgcgatcaaacttgctcaaata
gtgaatcaagatgactttgtatcaaagcatgggaaatctaatcatcagctctggtcagaa
ttgtgtgatttaatttctaaaaatccgacgaaaataaaatcgttgaaagttgatgctatt
atcagaggaggtttaagaagatacacagatcaagtaggatcactgtggaattctctggca
gattattacgtcagaagtggactttttgaacgagctcgtgatatttatgaagaagctata
cagacagtgacaacagtaagagattttacccaagtgtttgatgcttattctcattttgaa
gaattgattactgataaacgaatggaagaagttagcaataatcctaattctgatgaagat
gatgatatagagctggagttacggctagcgagacttgaacatttaatggaacgtagacct
cttcttctaaactcagttcttcttcgtcagaacccgcataatgttcaagagtggcataaa
agagtgaagttatatgagggacagccccatgaaatcatcaatacctataccgaagctgtg
caaacagttcaacctcatttagctgttgataaacttcatacactatgggtggcatttgcc
aaattttatgaggagaatgatcaaatatcagatgctagagtggtatttgaaaaagcaact
catgttccttatacaaaggttgatgatctagcatcagtttggtgcgaatgggcagaaatg
gagattcgtcatgggaattgtattgaagctttgaagttaatgcatcgagcaacagctata
ccatcaagaagagtagcttattatgatgaaacagagacagttcaaacgagactatataaa
tcattgaaagtgtggtcgatgtatgctgatttagaagaaagtttcgggacttttagaact
tgtaaagcagtttatgataatataatcaatcttaaaattgctactcctcagattatcatc
aattacggtctctttttagaagagaataattatttcgaagaagctttcagagcttacgag
aacggaattgcgttattcaagtggccaaatgtttatgacatttggaatacatatttaact
aaattcttgaaaagatatggaggtagtaagctagaaagaacgcgagatttattcgagcaa
tgtcttgaacattgtccacctaaatacgccaaagtcttctatttattgtatgctaaattg
gaggaagaacatggattagctaagcatgctatgaaagtttatgaacgtgctacaaatgct
gttcctaatgaagaaaggtttgagatgtttaatatttatatcaagaaggctgcggaaatt
tatggtgttccaaagacacgcgaaatttataaagaagctattgaagtattgaatgatgaa
aactcaagagaaatgtcgctgaggtttgcggaaatggagacaaagcttggagaagttgat
cgagcaagagctatctatgttcattgcagtgaaatatgtgaccccagagtcacttcccac
ttttggcaagtctggaaggaattcgaagtacgacatggaaatgaagatacaatgcgagag
atgctgagaattaaaagaagtgttcaagcaatgtataatactcaagtcaacatgatgtca
gcacagatgttgagcaatgtaaatatttctcagacttctgatactccggtagatgctatg
aaaatgctggatagcaaagctggtgctgatactaatacttcagtgactgctagaggtgct
attagcttcgttcgtggagttactgaaggtggagctgcgaataataatgctaaagttagt
aatccagatgaaataaatattgatacggatgatactgataatgaagaagaaggagaagaa
gatgttgaagaggaagatgtgcccgtcaaaaaacgaaaaattccttcagaagtctttggt
ggactgaagtccaatgatgatgaaggcgaataa
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