Chelonus insularis: 118074687
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Entry
118074687 CDS
T08669
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cins
Chelonus insularis
Pathway
cins03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cins00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118074687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cins03041
]
118074687
03009 Ribosome biogenesis [BR:
cins03009
]
118074687
Enzymes [BR:
cins01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118074687
Spliceosome [BR:
cins03041
]
Complex A
U2 snRNP components
U2 related factors
118074687
Complex B
118074687
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
118074687
Ribosome biogenesis [BR:
cins03009
]
Eukaryotic type
90S particles
Helicases
118074687
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
SRP54
AAA_19
nSTAND3
Cas3-like_C_2
ABC_tran
ResIII
T2SSE
nSTAND_NTPase5
AAA_7
AAA_25
TsaE
AAA_16
AAA_30
Motif
Other DBs
NCBI-GeneID:
118074687
NCBI-ProteinID:
XP_034952001
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MSKRRIEVADPYIKRKREDAKPEIPSSSSTATPVTPVTTTAKTPGQINPYTKLPFTARYY
ELYKKRITLPVFEYRADFMRLLNEYQCIVLVGETGSGKTTQIPQWCVEYSTQVGSKNVAC
TQPRRVAAMSVAQRVSEEMDVQLGEHVGYSIRFEDCSSPYTVLKYMTDGMLLREGMSDPM
LEAYQVILLDEAHERTLATDLLMGVLKEVTKQRTDLKLVIMSATLDAGKFQQYFDNAPLM
NVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEDVPGDLLLFLTGQEEIEEACKRIK
REMDNLGPEVGELKCIPLYSTLPPNLQQRIFEAAPPNKPNGAIGRKVVVSTNIAETSLTI
DGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAY
KNEMQENTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALD
DDGNLTDLGAIMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEAKKAA
DDAKMKFAHIDGDHLTLLNVYHAFRQSSEDPQWCYDHFVNYRSLKSGDNVRQQLSRIMDR
FSLKRTSTEFTSKDYYINIRKALVDGFFMQVAHLERTGQYLTIKDNQMVQLHPSSCLDHK
PEWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYDLQNFPQCEAKRQLEVIQARLESK
QYQEGF
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgaagaattgaagtcgcagatccatatattaaacgaaaaagagaagatgcc
aagcctgaaattccatcatcatcatcaacagcaacgccggtaacaccagtgacaactaca
gcaaagactccaggacaaattaatccatacacaaaattaccatttactgcaagatattat
gaattgtacaaaaaacggataacactgccggtctttgaataccgagcagattttatgcgc
cttctgaatgaatatcaatgcatagtattagtcggtgaaacgggatctggaaagactaca
cagataccacaatggtgtgtcgaatattcgactcaagttggttcaaaaaacgtagcttgt
acccagccaagaagggtagccgcaatgtcagtagcacaaagagtatctgaagagatggat
gttcagcttggcgaacatgtgggttacagtatacgttttgaagactgtagctcgccttat
actgtgttaaaatacatgactgacggtatgttgttgagagaaggcatgtctgacccaatg
cttgaagcttaccaggtcattttattggacgaagctcacgagagaactttagcaacggac
ttacttatgggtgtattgaaagaagtaacaaaacaaagaactgatctaaaattggttatc
atgagtgcgactttagatgctggaaaatttcaacaatattttgacaacgcaccattaatg
aatgtaccaggtcgaactcatccggtagaaattttttatactccagaaccggagcgagat
tacctcgaggcggctattagaactgttattcaaatacatatgtgtgaagacgtgcctgga
gatctgctgctatttttaactggtcaagaggaaattgaagaggcttgtaaaagaattaaa
agagagatggataatttgggaccagaagttggagaacttaagtgtatcccactatattca
actttacctcccaatttgcaacagagaattttcgaagctgcacctccaaataaaccaaat
ggagctattggacgaaaagttgttgtttccactaatattgcagaaacttctttaactatt
gacggtgttgtctttgtgattgatcctggatttgctaaacaaaaagtatacaatccaaga
attcgtgttgaaagtcttttagtatcaccaatcagcaaagcttcagcccaacagagagct
ggacgagctggaagaacgagacctggaaaatgttttagactctatacagaaaaagcgtac
aaaaatgagatgcaagagaatacatatcctgaaattttaagatccaatcttggaagtgtt
gtattgcagttgaaaaagcttggaattgatgatttagttcattttgatttcatggatcca
ccagctccagaaacgttaatgagggcattggaattgttgaattatttagctgcattagat
gatgatggaaatctaacagacttaggagctattatggctgaatttcctttggatcctcaa
cttgccaagatgttaattgcttcttgcaaccataattgcagtaatgaaatccttagtatc
actgccatgctgtcagtcccgcagtgttttgtaagaccaaatgaagcaaagaaggctgca
gatgatgcaaaaatgaaatttgctcacatcgatggtgatcatttgaccttacttaatgtt
tatcacgccttcagacaaagttcggaagacccacagtggtgttacgatcattttgtaaat
tatcgatctctaaaaagtggtgataacgttcgacaacaattaagtagaattatggatcga
ttttcattaaaacggacatcaacagaatttacatcaaaagattattatataaatataaga
aaagctttagtcgatggatttttcatgcaggtcgcacatttagagagaacaggacaatat
ttaacgattaaagataatcaaatggtacaattacatcctagtagttgtttagatcataaa
ccagaatgggtcatttataacgagtttgtacttacaactaaaaattatatcagaacagta
acagacataaaacctgaatggcttttaaaaattgcaccacaatactatgatctacaaaat
ttcccccaatgtgaagcaaagagacaattggaagtaattcaagcaagattagaatctaaa
caatatcaggaaggattctaa
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