Chelonus insularis: 118074919
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Entry
118074919 CDS
T08669
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cins
Chelonus insularis
Pathway
cins03022
Basal transcription factors
cins03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cins00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118074919
09124 Replication and repair
03420 Nucleotide excision repair
118074919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cins03021
]
118074919
03400 DNA repair and recombination proteins [BR:
cins03400
]
118074919
Enzymes [BR:
cins01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118074919
Transcription machinery [BR:
cins03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118074919
DNA repair and recombination proteins [BR:
cins03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118074919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
Herpes_U44
TniB
Motif
Other DBs
NCBI-GeneID:
118074919
NCBI-ProteinID:
XP_034952370
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MGPPKRIKKDERTKSKKRKEEEDYNDDDYGDNIDTDGIPDAAKNDVEKLEGNVEEDDYGA
KNYTKLMPLKPDNESRPIWVAPNGHIFLESFSPVYKHAHDLLIAISEPVCRPEHIHEYKL
TAYSLYAAVSVGLQTNDIIEYLNRLSKTEIPAGIVEFIKLCTLSYGKVKLVLKHNKYFIE
SSSPEVIQRLLKDPVIQECRLRKNIEETEKDGLIVSVQSKQKALQFGAKPLPNAQPTTSI
EKTENPEQVTSETAAIPEDITNFFDKMDKEDEDEEEEQELKIVSFEVNQEKIEVIQKRCI
ELEYPLLAEYDFRNDTVNANINIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAG
KSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAKDKPMGCGI
LITTYSMITHTQKRSWEAEQTMKWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLG
LTATLLREDDKIADLNFLIGPKLYEANWLELQKKGFIARVQCAEVWCPMVSEFYREYLTC
KMNRKLLLYVMNPNKFRACQFLIRYHERRGDKTIVFSDNVFALKHYAIKMNKPYIYGPTS
QSERIQILQNFKYNTKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILR
AKKGAIAEEYNAFFYTLVSQDTMEMNYSRKRQRFLVNQGYAYKVITKLAGMDEEPDLLYK
TKEEQAQLLQQVVLANDTDADEERIPGEGPRPAFRKAGNLSSMSGADDAVYYEYKKPASS
STANKHPLFKKFRP
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgccaaaaagaattaaaaaagatgaacgcacaaaatcaaagaaacgtaaagaa
gaagaggattacaatgatgatgactatggagataatatagacactgatggtataccggat
gctgcaaaaaatgatgtcgagaaattagaaggaaatgtggaagaggatgattatggagca
aaaaattacacgaaactgatgcccctgaaacctgacaatgagtcgagacctatatgggtt
gcacctaatggccacattttcctcgagtcattttctcctgtttacaaacatgctcatgat
cttttaattgccatatctgaacctgtatgcaggccagaacacattcatgagtataagctg
acagcatattcattatatgcagctgtcagcgttggtttacaaacaaacgatatcattgaa
tacctaaatagactgagtaaaactgaaatccctgcaggaatagtagaatttattaaatta
tgtacattgtcctatggtaaagtaaaacttgtcttgaaacacaacaaatactttatagaa
tcttcatccccagaagtaatacaaagattattaaaagatccagtaattcaagaatgcaga
ttaagaaaaaatattgaagagactgaaaaagatggattaatagtaagtgttcaaagtaaa
caaaaagcattgcaattcggtgcgaaaccattgccaaatgctcagccaacaacgtcaata
gaaaaaacagaaaatccagaacaagtaacaagcgaaactgcagctattccagaagacata
acgaatttttttgataaaatggacaaagaagatgaagatgaagaggaagaacaagaatta
aaaattgtcagctttgaagtaaatcaagagaaaatagaagtcattcagaaacgatgtatt
gaattggaatatcctttactagcggaatatgatttcagaaatgatacggttaatgcaaat
attaacattgacctcaaaccatcagcagtattgagaccttatcaagaaaaaagcttacga
aaaatgtttggaaacggtagagctcgttctggagtaattgtattaccttgtggagctgga
aaaagtttagtcggggtaacagcgtgttgtacagtccgaaaaagagctctagttctttgc
aactctggagtctctgtagaacaatggaagcaacaatttaaaatgtggtcgacagcagat
gattccatgatttgtcgttttactagtgaagctaaagacaaacctatgggatgtggaatt
cttataacgacatattcgatgataactcatacacaaaaacgatcttgggaagcagaacag
actatgaaatggcttcaagagcaagaatggggtataatggttttggatgaagtccataca
attcctgcaaaaatgttcagaagagttttaaccattgttcaatcacattgtaaacttgga
ttgactgcaactttactcagagaagacgacaaaattgctgacctcaactttctaatcggc
cccaagttgtatgaggctaactggctagagctacagaagaaaggatttatcgcaagagtt
cagtgtgctgaggtatggtgtccaatggtatcagaattctacagagaatatctaacctgc
aaaatgaatagaaaactgttactttatgtgatgaacccaaataaattccgagcttgtcaa
tttttgataaggtaccacgagagaagaggagataaaacgattgttttctctgataatgtg
tttgctttaaagcactatgctataaaaatgaataaaccttatatttatgggccaacaagt
caaagtgaaagaattcaaattcttcaaaattttaaatacaacaccaaagtgaatactatt
ttcgtcagtaaagtcgctgatacttcttttgatttgccagaagccaatgttctgatacaa
atctcttcacatggtggatctagaagacaagaagctcagcgtttaggaagaattttgaga
gcaaaaaaaggtgctatcgctgaagaatacaatgctttcttttacactttagtatcccaa
gatacgatggaaatgaattactcaagaaaacgtcaacggtttttagtaaatcaaggatat
gcttataaagtgattactaaattagctgggatggatgaagaacctgatttattgtacaaa
accaaagaagaacaagctcaacttttacaacaagttgtattagcaaatgacacagatgct
gacgaagagaggattcctggagaaggtcctcgaccggcttttcggaaggctggaaacttg
tcttcaatgtctggagcagatgatgcagtgtattatgaatataaaaaaccagcttcatca
tcaacagcaaataaacatccactatttaagaaattcagaccatga
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