Clostridium intestinale: HZF06_00165
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Entry
HZF06_00165 CDS
T08934
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cint
Clostridium intestinale
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cint03400
]
HZF06_00165 (addB)
Enzymes [BR:
cint01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZF06_00165 (addB)
DNA repair and recombination proteins [BR:
cint03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HZF06_00165 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
AAA_19
Bac_DnaA
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QLY80051
UniProt:
A0A7D6W0K3
LinkDB
All DBs
Position
32159..35623
Genome browser
AA seq
1154 aa
AA seq
DB search
MGIRFIYGRSGAGKTHFCLQAIKKRIDENKEGKFILIVPEQFTFRAENALLNQVGERALL
KTEVLSFKRMAQRVFSECGGLTIRKMQDSGKAMIIYKVLQEIEKELKIFNKASKQNGFID
IIDKTITEFKKYNITPEILEEISKDLSDENLELKYKLIDLEKIYLRFNEVLHENYIDTDD
ELTMLSTKLKDCKLYDKTEIWIDEFTTFTPQQLDIIKTISKKAKRVNITLVGDEWNPKEE
VESTDLFNVTKSTEKRILKIMEENRIPFDGVINVNDGTPYKLRGSKELAHLEKYFYSYPF
NEFKNKVEGLTIYKASNSYEEIQTIAKKIKEYVRDRGYRYNNISIVCRNIDDYEKITSVV
FNEYEIPYYIDKKRDILNNPFVVLVTSLFEVYNKNWNYESLFKYLKTGLTGLETKYIDII
ENYVLAYGVNKKHWLSEEDWDYYPLGFTNENEQDENMKILINEIKDEVKRPLISFYNKTK
GEKKVREICEAIYDFLTEINAVSRVSSWIDKFNEEGIQDKEKEYSQILSIVMEVLDQAVD
VMGNEKMDIKKFSKVLTGGFEKYELGLIPLSLDEVTVGDITRVRSKEVRILFLIGVNDGV
IPATTKDEGILSDRDRELLKNKGVALASDSKAKAFEEQLLVYTALTISSERLIITYPMAD
FEGKSLRPSIIIPRIKKLFPKLIEDSDISKKVQAFDKIVAPIPTFNELIGAVRKDYDEEV
VEEYWGEVYSWYKKEDKWKQKAKNLERALNYTNQDEDLPKDKARKIYSSQNGKLLFSVSR
LEKYAQCPFSYYVQYGLKAKDRKIYEFSAPDLGSFMHEILDGFTTYVRDKKINWSELDKD
KCSNIISMLVDKKLDENQGFILNSSKRYKYFTDRFKRILSKSVSAVSEHMKRSTFEIYKN
EFEFSSFKDAEPIKIKLDDGEEVSLVGRVDRVDVAEIDGESYIRVIDYKSGSKKFDLTKL
YHGLQIQLLVYLDALIKNSKYFLNKSTLPGAILYFRIDDPLIAAEKRITEEEIQKKVLSS
FKMDGLVLKDPKIIKAMDNDPGLYSVVIPAGIKKDGDVSSTSSVATEEQFETLRKYVNYK
IKEICSDMLKGNIKINPAKESNFAYCDFCDYSSVCQFDTSLKDNKYKLIKLKKKEEVWQE
MQEDIKKNEEGGKE
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgggtattaggtttatatatggtagatctggagctggaaagactcatttttgtcttcaa
gctataaaaaagagaatagatgaaaataaagaaggaaagtttatactaatagttcctgaa
caattcacatttagagctgaaaatgcattactaaatcaagttggagagagagctttactt
aaaacagaagtattaagctttaaaaggatggctcaaagagttttttcagaatgtggtggc
ttaactattaggaagatgcaagattcaggaaaagctatgataatatataaggttcttcaa
gaaatagaaaaagaacttaagatatttaataaagcatctaagcaaaatggatttatagat
attatagataagacaataactgaatttaaaaagtataatattaccccggaaatattggag
gaaatatcaaaggacttaagtgatgaaaatttagagttaaaatataagctaatagattta
gaaaagatatatctacgctttaacgaagttttacatgaaaattatattgataccgatgat
gaacttactatgttatctactaagttaaaggactgtaagctatatgataaaacagaaatt
tggatagatgaattcactacatttactccacagcagttagacataattaaaactatttct
aaaaaagcaaagagagtaaatataaccttagtaggcgatgaatggaatcctaaagaagag
gttgaatctacagatttatttaatgtaactaaaagtacagaaaagagaattcttaagatt
atggaggagaataggattccttttgatggagttataaatgttaatgatggaactccatac
aagttaagaggttctaaggagctagcccatcttgaaaaatacttttattcatatccattt
aacgagtttaagaataaagttgaaggattaaccatatataaggcttctaatagttatgag
gagattcaaactatcgctaaaaagattaaagaatatgttagagatagaggatataggtat
aataatatatccatagtttgtagaaatattgatgactatgaaaaaataacctcagttgta
tttaatgaatatgaaattccttattacattgataaaaaaagagatatattaaataatcct
tttgtggttttagttacatctttgtttgaagtttataataagaattggaattatgagagc
ttatttaagtatcttaagacaggacttacggggcttgaaactaaatatatagatataata
gaaaattatgtccttgcttatggtgtaaataaaaaacattggctatcagaagaggattgg
gattattatcctttaggcttcaccaatgagaatgagcaagatgagaatatgaaaatactt
ataaatgagattaaagatgaggtaaaaaggcctcttataagtttttataataaaactaag
ggagaaaagaaagtaagagaaatatgtgaagctatttatgactttttaactgagataaac
gcagtaagcagggtatcaagttggatagacaagtttaatgaagaaggtattcaagataaa
gaaaaagaatattctcaaattctttctatagttatggaagttttagatcaagctgtagat
gtaatgggaaatgagaaaatggatataaagaaattctcgaaagtattaactggaggcttt
gagaaatatgaattaggactcataccattatccttagatgaggtgacagtaggagatata
acaagggtcagaagtaaagaggtaaggattttattcttaataggagttaatgatggggtt
attccagctactactaaagatgaaggaatattgtctgatagagatagagagttattaaaa
aataaaggggtagcattagcatctgattcaaaagcaaaagcatttgaagagcagctatta
gtttatacggcgctaacaatatcaagtgaaagattaataataacctatcctatggcagac
tttgaaggaaagtccttaagaccttcaataataatacctagaataaaaaaattattccct
aaattaattgaggatagtgatataagcaaaaaggttcaagcttttgataaaatagttgcg
cctattcctacttttaatgaacttataggagcagtaagaaaagactatgatgaagaggtt
gtagaagaatattggggagaggtttatagttggtacaagaaagaggataaatggaagcaa
aaagctaaaaatcttgaaagagctttaaattatacaaatcaagatgaagatttacctaaa
gataaagctagaaagatatattcatctcaaaatggaaaacttttattttcagtttctagg
cttgaaaaatatgctcagtgtccattttcttattatgtccaatatggattaaaagctaaa
gatagaaagatatatgagttttcagcgccagatttaggttcctttatgcatgagatatta
gatggttttactacttatgtaagagataaaaagataaactggagtgaactagataaggat
aaatgcagcaatataatttctatgcttgtagataaaaaactagatgaaaatcaaggattt
atattaaatagctccaaaagatataaatattttacagatagatttaaaaggatattatct
aaatctgtatcagcagtatctgaacacatgaaaagaagtacttttgaaatttataaaaat
gagtttgaattctcaagttttaaggacgcagagcctataaaaatcaaacttgatgatggg
gaagaagtatctctagtaggaagagttgatagggttgatgtagcggaaatagatggagaa
agctatattagggttattgattataagtcaggtagtaagaagtttgacttaacaaaactt
tatcatggacttcaaattcaattattagtatatttagatgctttaataaagaattctaaa
tacttcctaaataaaagcactcttccaggagctatattatactttaggatagatgatcca
cttatagcagctgaaaagaggataactgaagaagagatacaaaagaaagttttatcctcc
tttaaaatggatggattagtacttaaagatcctaagataataaaagctatggataatgat
ccaggactttattctgtagtaataccagcaggaataaaaaaggatggagatgtttcttcc
acaagctcagttgctactgaagaacagtttgaaaccttaaggaaatatgtcaactataag
ataaaagaaatatgttcagatatgcttaaaggtaacataaagataaatcctgcaaaagag
agcaattttgcttattgtgatttttgtgattactcatcagtatgtcagtttgatactagc
ttaaaggataataaatataagctaattaagttaaagaaaaaagaagaagtatggcaagaa
atgcaggaagatataaaaaagaatgaagaaggagggaaagagtaa
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