Clostridium intestinale: HZF06_00215
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Entry
HZF06_00215 CDS
T08934
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cint
Clostridium intestinale
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cint03400
]
HZF06_00215
DNA repair and recombination proteins [BR:
cint03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HZF06_00215
Archaeal homologous recombinant proteins
HZF06_00215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
T2SSE
ABC_tran
AAA_22
SMC_N
AUDH_Cupin
AAA_18
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QLY80061
UniProt:
A0A7D6ZGV1
LinkDB
All DBs
Position
49395..52532
Genome browser
AA seq
1045 aa
AA seq
DB search
MRPIKLVMSAFGPYAKEEVLDFTNLREKNIFLITGPTGAGKTTIFDALSVALYGEASGSS
RDKDSLRSDFAEDGIATYVELSFSLRGKNYVIKRHPQQFKKKSRGEGYVQKSAEAELMLP
EGKIVTGVKSVDEKIAEILGITSQQFKQIVMLPQGEFRRLLEAESLEREKIFRKIFGTEA
FLMVQKNLEEKERDLNKGISKIIEERDVYIRSIDPGEEEYLFALKEAKDKNLQEILDLTK
DLIARDEEKIWKFKADIENIKLTTEELQTKLTRALDINKKLKYKIELKEHLERQLLKDSE
IKYKVKELDLGRKSLELMPIEEQLIQKNQTKINREKELIESRNILDINSRKLEEAKKVLE
QENKNEDLRKKVTEIIGNLKSFEPKVINYEKKKSNLREIINRRKDIEAKRSNVKTEIINL
KAELEKIDSTINEIQRKELLKVKKEQELELISKDIKLLLELHNKCSKYYNKELEYKKALI
ELDVLRKNHEECNKAYMEAYDLFIKGQAGILAKALEENKPCPVCGSMEHPKKALKLKETP
TAEQVDEKKLILNKSEKELTAKGNDIAAIKASLEELKISYMDSYENTSHIIKENLEDLKI
EEKLNVIKFKGTEIRNLQKGLEKEIEELNTIIITKDRVQKQKEEIITKSNEKEKQRESLE
KDFTEIYGVVKSEKELLLNIEQEIPEDKRELNLLRAEIEKYTLSLEILEKAYKDAINNFS
NLSSIKASSEENLKGKDNSLKEIIKELEESKDKFNDSLKKHGFMDYNEYINLKRTKVQID
ILDKEIKEYNENLKSLKDRLLEIEKETQGLKEIDIEIINEEIKLLKNKEEAINEGNSRIF
SRVDNNKKQLNKILKLTASIAKGEKEYSIIGDLSRLAKGDNGEKISFERYVLAAYFNEII
NAANIRLMKMTSRRFMLKRKENRVKGSKQSGLELEVFDNYTGKARHVKTLSGGESFKASL
ALALGLADVVQSYTGGIKVDTMFIDEGFGSLDQESLDNAINCLIDLQQGGRLVGIISHVS
ELKERIDARLEVTPAKEGSHIRFNL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaattaaactcgttatgagtgcgtttggaccttatgcaaaagaagaggtatta
gattttactaatcttagagaaaaaaacatatttctaataactggaccaacgggagcagga
aaaacaactatatttgatgccttaagtgttgccttatatggagaagcttctggaagtagt
agagataaggatagcttaaggagtgattttgcagaagatggaatagctacttatgtggaa
ttatcattttctcttaggggtaaaaattatgttataaaaagacatcctcaacagtttaag
aagaaatcaagaggagaagggtatgttcagaaaagtgctgaagcagagttaatgcttcct
gaaggtaaaatagttactggggttaaatcggtagatgaaaagatagctgaaatattgggt
ataacaagtcaacaatttaaacaaatagtaatgcttccgcagggagagtttagaagacta
ttagaggcagagagtttagagcgagaaaaaatatttagaaagatatttggaacagaagcc
tttttaatggtacaaaaaaacttagaagaaaaagaaagagatttaaataaaggaatatct
aaaattattgaagaaagagatgtttacataagaagtatagatcctggtgaggaagagtat
ctttttgcactaaaggaagctaaggataaaaacttacaagagatattagatctaactaaa
gatttaatagctagagatgaagaaaagatttggaagtttaaagcggatatagagaatatt
aaacttactacagaagagcttcaaaccaaattgacaagagctttagatataaataaaaaa
ttaaaatataaaatagaacttaaagagcacttagaaagacaattgttaaaagatagtgaa
attaaatataaggtgaaagagcttgatttaggaagaaaatccttagaattaatgcctatt
gaagagcagttaatacaaaaaaatcaaaccaagattaatagagaaaaagaattaatagag
agtagaaacatattagatattaattctagaaaattagaagaagcaaagaaggttttagag
caagaaaataaaaatgaggatttaagaaaaaaagtaacagaaataataggaaatcttaaa
agctttgagccaaaggtcattaattatgagaagaagaaatctaatttaagagaaataata
aacagaagaaaagatatagaagcaaaaagaagtaatgttaaaacagaaataataaatcta
aaagctgaacttgaaaaaatagatagtactattaatgaaatccaaaggaaagaactatta
aaagtaaaaaaagaacaagaactagagcttatatctaaggatataaaactattgcttgag
cttcataataagtgcagtaagtattataacaaagaattagaatataaaaaagctttaata
gaattagatgtattaagaaaaaaccatgaggaatgtaacaaagcttatatggaagcttat
gatttgtttataaaagggcaggcaggtatcttagcgaaagctttagaagagaataaacct
tgtcctgtatgtgggtcgatggaacatcctaaaaaagcattaaagcttaaagaaacacct
acagcagagcaggtagatgaaaagaagcttatacttaataagtcagagaaagaacttaca
gctaagggaaatgatatagcagctataaaagcatctttagaggaattaaaaatctcttat
atggatagttatgaaaatacatcacatataataaaggaaaatttagaagatcttaaaatt
gaagagaagttaaatgtaataaaattcaaaggtacagaaataaggaatttacaaaagggt
ttagagaaggaaatagaagagcttaataccattataattacaaaagatagagttcagaag
caaaaggaagagataattactaaatctaatgaaaaagaaaaacaaagagaaagtttagaa
aaagattttactgaaatatatggtgttgttaaatctgaaaaagaacttttattaaatatt
gaacaagagatacctgaagataagagagaacttaatttattaagagctgagatagaaaag
tatacactttctcttgaaatcttagaaaaagcttataaagatgcaataaacaatttcagt
aacttaagttctataaaagcatcaagtgaggaaaatttaaaaggtaaagataatagttta
aaagaaataattaaggaattagaagaaagtaaagataagtttaatgattctttaaagaaa
catggctttatggattacaatgagtatattaatttaaagagaactaaggttcaaatagac
attttagataaagaaataaaagaatataatgaaaacttgaaatccttaaaagacagatta
ttagaaatagaaaaagaaacacagggattgaaagaaatagatatagaaatcatcaatgaa
gaaataaagttattgaaaaataaagaagaagctataaatgaaggaaatagtagaatattc
tcaagggtggataataataaaaaacagttaaataaaattttaaaattaaccgctagtata
gctaaaggagaaaaagaatacagtataataggtgatttatccagattagctaaaggggat
aacggtgagaaaattagctttgaaagatatgtattagcagcttattttaatgaaataata
aatgctgcaaatataagacttatgaaaatgactagtagaagatttatgcttaaaagaaaa
gaaaacagagtaaagggaagtaaacagtcaggtttagaactagaggtgtttgataattat
acaggtaaagcaagacatgtaaaaactttatctgggggagaaagctttaaagcatcctta
gctttagcattaggattagcagatgtcgtccaaagctatactggcggaataaaagttgat
acaatgtttatagatgaaggctttggaagcctagatcaagaatctttagataatgcaata
aactgcttaattgaccttcagcaagggggaaggttagtagggataatatctcacgtgtct
gagttaaaagaaagaatagatgcaaggttagaggtaactcctgcaaaagaaggaagtcat
ataagatttaatctatga
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