Clostridium intestinale: HZF06_01180
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Entry
HZF06_01180 CDS
T08934
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cint
Clostridium intestinale
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cint03016
]
HZF06_01180 (truA)
Enzymes [BR:
cint01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HZF06_01180 (truA)
Transfer RNA biogenesis [BR:
cint03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HZF06_01180 (truA)
Prokaryotic type
HZF06_01180 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QLY80227
UniProt:
A0A7D6VQ24
LinkDB
All DBs
Position
254048..254785
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AA seq
245 aa
AA seq
DB search
MRNLKMIIQYDGTRYKGWQRQKDNDLTIQGKLENVLSKMTGETIQVIGCGRTDSGVHAEN
YVANFHTNCEYSIKTIMGYLYDFLPEDIVVKSIKDTGERFHARYNVKSKTYIYRINNSKV
RNVFNRKYVYHTDENLDLENMRKGAEYLIGTNDFQSFTSLKHNTKSTVRTINYIDIKEND
GLIEIEVNGNGFLLNMVRIITGTLLEVAKGKLKPEDVKRILDEKRRAEAGPIAQPKGLIL
KDVTF
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacttaaaaatgatcatacaatatgatggaacacgctataaagggtggcagaga
cagaaggataacgacttaactatacaagggaaattagaaaatgttttatctaaaatgaca
ggtgaaactatacaagtaataggttgcggaagaacagattcaggagttcatgctgagaac
tatgtagcaaacttccacactaattgcgaatacagtattaaaactataatgggataccta
tacgactttttgccagaagatatagtagttaaatctataaaagatactggtgagagattc
catgcaagatataatgttaaatcaaagacttatatttacagaataaataatagtaaagtt
agaaatgtttttaacagaaagtatgtatatcatactgatgagaatttagatttagaaaat
atgagaaaaggtgctgaatatttaatcggaactaatgattttcaaagttttactagtcta
aagcataataccaaatctaccgttagaactattaattatatagacataaaagaaaatgat
ggtttaatagaaattgaggttaatggaaatggattcttattaaatatggtgagaattatt
acaggaactcttttagaagttgcaaaaggaaaacttaaaccagaggatgtaaagagaatt
ttagatgaaaaaagaagagcagaggcgggtcctatagctcaacctaaagggttaatacta
aaagatgtaacattttaa
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