Clostridium intestinale: HZF06_01885
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Entry
HZF06_01885 CDS
T08934
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cint
Clostridium intestinale
Pathway
cint03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZF06_01885
09124 Replication and repair
03420 Nucleotide excision repair
HZF06_01885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cint03021
]
HZF06_01885
03036 Chromosome and associated proteins [BR:
cint03036
]
HZF06_01885
03400 DNA repair and recombination proteins [BR:
cint03400
]
HZF06_01885
Enzymes [BR:
cint01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HZF06_01885
Transcription machinery [BR:
cint03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HZF06_01885
Chromosome and associated proteins [BR:
cint03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HZF06_01885
DNA repair and recombination proteins [BR:
cint03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HZF06_01885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
Helicase_C
PDDEXK_1
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
QLY80357
UniProt:
A0A7D6VT89
LinkDB
All DBs
Position
396955..399324
Genome browser
AA seq
789 aa
AA seq
DB search
MRITMDIKELRISVRNLIEFILRRGSIDSGYTGNKRAQEGTKAHQYLQKENSKTYETYKK
EVYLKHVFSREDIVLTVEGRADGIIDLDGKIIIDEIKSTTRDLIDIQEEDNLLHWAQVKF
YGYMYLIENSLENIELQLTYINLESNEVKSFLKEFNLKELEEFVNSVVDEYVKWAEFTLE
WKEIRNNSIKDLTFPFPKYRQGQREFAVVIYNTIRSNGMLFAQAPTGIGKTISTLFPSIK
ALGEQQADRIFYLTAKTITRTVAEESISILRDEDLRVKSITLTAKDKICFSEEGKCNPED
CPYAKGYYDKVNEALFKILNNEDEFTREKIEEYAREYEVCPFEFSLEISIWCDVIIGDYN
YAFDPRVYLKRFFDERTEDYIFLIDEAHNLVSRGREMFSAAISKRKILDLKNLLKGEKKL
TRRLNKINNYLIALRKEGDRKGENEFITEEPNVVYEYIRDYLKECDEFLINNRDFQYYQE
VLDVYFELNTFINMSELYDENYLSLVIIDGNELILKLYCINPRDNLITGMNRAKSKVIFS
ATLSPSSYFIELLGGEENSYKMSLPSPFPKENLLTLIAPISTRFKHRGATIEKILLMIIE
FVKGKKGNYMCFFPSYRYMKQAEELLTKLSDEIIYIPQKENMTEIEKEDFLDKFKKPKEK
VQLGLCVMGGIFSEGIDLKGDSLIGAIIVGVGLPQLSFEQNLIKDFFNEVGTGYDYAYVY
PGINKVMQAVGRVIRREEDKGAVLLIDDRFLTEKYIKLMPEGWRDFKVVKDNSSINKQIK
EFWRSNNEK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaggataaccatggatataaaagaactaagaatatctgtaagaaatcttattgaattc
attttaagaagaggaagtatagatagcggatatacaggtaacaagagggcacaagaagga
actaaagctcatcaatatttacaaaaagagaatagcaaaacctatgaaacttataaaaaa
gaagtttatttaaagcacgtatttagtagagaagatatagtattaacagtagaaggacga
gctgatgggataatagatttagatggaaagataattatagatgaaataaaaagtacaact
agagatttaattgatatacaagaggaagataacttactacattgggctcaggttaaattt
tatggatatatgtatttaatagaaaatagtttagaaaacatagagttacaacttacatac
ataaacctagaaagtaatgaagtaaaaagcttccttaaggagttcaaccttaaggagctt
gaggagtttgtaaacagtgtagtagatgaatatgtaaaatgggctgagtttactttagag
tggaaagagattaggaataattctataaaagatttaacatttccctttccaaagtataga
caagggcaaagagaatttgcagttgttatctacaataccataagaagtaatggtatgctt
tttgcacaagcgcctacaggaataggaaaaaccatatcaacactttttcctagcataaag
gcattaggtgagcagcaggcagatagaatattttatttaacagctaagacaattacaagg
acagtagctgaagagtccataagtattttaagagatgaagatttaagagtaaaaagcatt
accttaacagctaaagataaaatttgctttagtgaagagggaaaatgtaatccagaagat
tgtccttatgcaaaagggtattatgacaaagtcaatgaggctttatttaaaatacttaac
aatgaagatgaatttacaagagaaaaaatagaagaatatgctagagaatatgaagtatgt
ccatttgaattttctttagaaatatcaatttggtgtgatgtaataataggggactataat
tatgcatttgatcctagagtatacttaaaaagattttttgatgaaagaacagaggactat
atatttttaatagatgaagctcataatctagtatctagaggaagagagatgttttcagca
gctataagtaaaagaaagattttggaccttaaaaatcttttaaagggagaaaaaaagcta
acaagaagattaaataagataaataattatttaatagctttgagaaaagagggggatagg
aaaggcgaaaatgagtttataacagaagaacctaatgtggtatatgaatatattagagat
tatttaaaagagtgtgatgaatttctaataaataatagggattttcaatattatcaagag
gttttagatgtttattttgagttaaacacctttataaatatgagtgaattatatgatgaa
aattatttaagcctagttattattgatggaaatgaactaatattaaagctttattgtatt
aatccaagagacaatcttataactggaatgaatagagctaaaagtaaggttatattttca
gcaacattatcaccaagcagttattttatagaacttcttggaggagaagaaaatagttat
aagatgagtttaccctcaccttttccaaaagaaaacctattaaccttaatagcgcctata
tctacacggtttaaacatagaggggcaacaatagaaaagatactccttatgataatagaa
tttgtaaaaggtaaaaaaggtaactatatgtgtttctttccgtcttatagatatatgaag
caagctgaggaacttttaactaagcttagtgatgagattatatatatacctcaaaaagaa
aatatgactgagatagaaaaagaagattttttagataagtttaaaaagccaaaggaaaag
gtacaactaggattatgtgtaatgggaggaatattctcagaaggaatagatttaaaaggt
gattccttaataggagcaataatagtaggggtaggtctcccacaactatcttttgagcaa
aatctaattaaagacttttttaatgaagtgggaacagggtacgattatgcatatgtttat
ccagggattaataaagttatgcaggctgtagggagagttattagaagagaagaggataaa
ggtgcagttttattaatcgatgataggtttttaactgaaaagtatattaaacttatgcct
gaaggttggagagattttaaagtagttaaagataacagttctataaataaacagataaaa
gaattctggaggagtaataatgaaaaataa
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