Clostridium intestinale: HZF06_04130
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Entry
HZF06_04130 CDS
T08934
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cint
Clostridium intestinale
Pathway
cint03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZF06_04130 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cint03019
]
HZF06_04130 (recQ)
03400 DNA repair and recombination proteins [BR:
cint03400
]
HZF06_04130 (recQ)
Enzymes [BR:
cint01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZF06_04130 (recQ)
Messenger RNA biogenesis [BR:
cint03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HZF06_04130 (recQ)
DNA repair and recombination proteins [BR:
cint03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HZF06_04130 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
Helicase_C
DEAD
RecQ_Zn_bind
HTH_40
ResIII
Helicase_Sgs1
UQCC3
Motif
Other DBs
NCBI-ProteinID:
QLY80786
UniProt:
A0A7D6VRZ6
LinkDB
All DBs
Position
873947..876358
Genome browser
AA seq
803 aa
AA seq
DB search
MIDRGLELLERYFGYKSFRRGQDDIIKNIVEGNDVLAIMPTGGGKSICYQIPALMLEGMT
VVISPLISLMKDQVDTIKEMGIEAAYINSSLSTNEFKEVLDGIRSDRFKIIYVAPERLES
YEFLSILGEKNISQVAIDEAHCVSQWGHDFRTSYRKIPFFINSLKNRPIITAFTATATNE
VREDIINILSLKTPKVFISGFDRENLKITIVKSGSKKDYLLDYINNHKEDSGIIYAATRK
EVDAAYTLLLKKGFSAGRYHAGLSDNEREKNQEDFIYDRVNIMVATNAFGMGIDKSNIRY
VIHYNMPKNIESYYQEIGRAGRDGLDSECVLLFTPGDVQTQKYLIEMSIENPERKNNQYK
MLQYMVDMIHSNDCYRRFILNYFGDEYPKDCNNCSNCESEGEIVDRTLDAQKVLSCIYRM
KRSFGSTMIVDVLRASKNKKLQEFKFNELSTYGIMKEFSKDDLKNFINTLISHGYMDMVE
GTYPVIRLNDRSIKVLKGEEQVKFKEIKVERVFKLDDSLYEELRTLRREISEREGVPPYI
IFPDVTLKDMSIKHPVNKEQMLLISGVGEVKYNKYGEEFEKLILKYLEKNRAILDDEVCY
VSTDERLLEELIKVRNSIAKKENQLPQAVIAKNTLKEISGRYPRDTDNLKDITGLGPKKI
ERYSEKILEIVNNYVLENGIEVKWRDKKRNKLIIDGEHRKPDEIAIDMLKEGKELQYISQ
ELEVSISTVLGYVTDYLESGRELEFSLDIRGLYTEEERALIINECRSSGYSSISSIKRKL
PDNIKYESIRAVILDEYYLKDKV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatagaggattagaactgttagaaagatattttggatacaagagttttagaaga
ggacaagacgatattattaaaaatattgttgaaggtaatgatgtattagcaattatgcct
acaggtggaggtaagtctatctgttaccaaattcctgcgcttatgctagaaggaatgaca
gtagtaatttctccattgatttctttaatgaaggatcaggttgatactattaaagaaatg
ggaatagaggcagcctatataaacagctcattatcaactaatgaatttaaagaagtatta
gatggaataagaagtgatagatttaaaatcatatatgtggctccagaacgacttgaatct
tatgaatttttatctatacttggagagaaaaatatatcacaagtagctattgatgaagct
cactgtgtatctcaatggggacatgattttagaacaagctacagaaagataccttttttt
attaatagtttaaaaaatagacctataataactgcttttacagcaacagctacaaatgaa
gtaagggaagatataattaatattttatctcttaagactccaaaagtatttatatcaggt
ttcgatagagaaaaccttaagataactatagtaaaatcaggtagtaaaaaggactatctt
ttagattatataaataatcataaagaagattcaggtataatatatgcagctacccgtaaa
gaagtagatgcagcttatacattacttttaaaaaaaggtttttctgcgggaagatatcat
gcaggcttatctgataatgaaagagaaaaaaatcaagaggattttatctacgatagagtt
aatataatggttgcaacaaatgcttttggtatgggaatagataaatctaatattagatac
gttattcattacaatatgcctaaaaatatagaaagctactatcaagaaataggtagggca
ggtagagatggtttagatagcgaatgcgtattgttatttactcctggggatgtacaaact
caaaagtatttaattgaaatgagtatagaaaatccggagagaaaaaataatcaatataaa
atgcttcaatatatggttgatatgattcactctaatgattgttatagaagatttatactt
aactattttggagatgagtatcctaaggattgtaacaattgtagtaattgtgaaagtgaa
ggagaaatagttgatagaaccttagatgcacagaaggttttatcctgcatatatagaatg
aagagaagctttggttctacaatgattgtagatgtacttagagcatctaaaaataagaaa
cttcaagagtttaagttcaatgaattatctacctatggaataatgaaggagttctccaaa
gacgatttgaagaatttcataaacactcttatttctcatggatatatggatatggtagag
ggaacttacccagttattagattaaatgataggtctataaaagtattaaagggagaagaa
caggttaaattcaaagaaatcaaggtggaaagagtatttaagcttgatgattcattatat
gaagagcttagaactttaagaagagagatttcggagagagagggagttcctccttacata
atattccctgatgtaacattaaaggacatgtctataaaacatccagttaataaagagcaa
atgcttttaatatctggagtaggtgaggttaagtataataaatatggtgaggaatttgaa
aagttaatactaaaatatttagagaaaaatagagctattttagatgatgaggtatgttat
gtttcaactgatgaaagattattagaagaattaataaaggttagaaattctattgctaaa
aaagaaaatcaacttcctcaagctgtaatagctaaaaatacattaaaagaaataagtgga
aggtatcctagagatacggataacttaaaggatataacaggtcttggacctaagaaaata
gaaagatattcagagaaaatcttagaaatagtaaataactatgtattagaaaatggtatt
gaagttaagtggagagataagaaaagaaataagctgataatagatggcgagcatagaaag
ccggatgaaatcgcgatagatatgcttaaggaaggaaaggaacttcaatatatttcccag
gaattagaggtttcaatatctacggtactaggttatgttactgactatttagaatcagga
agagaactagaattttccttagatataagagggttatatacagaagaggagagagcttta
attataaatgagtgcagaagctcgggttacagctctataagttcaataaagagaaaactt
cctgataacataaaatatgagagtataagggcagttattttggatgaatactatcttaaa
gacaaggtttaa
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