Clostridium intestinale: HZF06_05005
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Entry
HZF06_05005 CDS
T08934
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cint
Clostridium intestinale
Pathway
cint03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZF06_05005 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cint03019
]
HZF06_05005 (recQ)
03400 DNA repair and recombination proteins [BR:
cint03400
]
HZF06_05005 (recQ)
Enzymes [BR:
cint01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZF06_05005 (recQ)
Messenger RNA biogenesis [BR:
cint03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HZF06_05005 (recQ)
DNA repair and recombination proteins [BR:
cint03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HZF06_05005 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF763
HHH
Integrase_H2C2
Motif
Other DBs
NCBI-ProteinID:
QLY82280
UniProt:
A0A7D7A6T9
LinkDB
All DBs
Position
1065749..1067521
Genome browser
AA seq
590 aa
AA seq
DB search
MFEKSRIEEVLNKVYGYSSFRNGQWELINNILNRRDTFGILPTGAGKSICYQIPALIFEG
ITIVISPLISLMKNQVDSLRAVGIDSIYINSSMSIDEIRKVEIDIIKGKYKIIYIAPERL
SSNYTIKLFSNLMVSQVVIDEAHCVSQWGHDFRKSYKDIAPFIKSLNSDPVISAFTATAT
REVREDSVNLLELRNPYIYIGSFNRENLIINIHKEIDKLEFIKDCIRDIDESSIIYCLTK
KEVDGLYIYLKDLGFSVCKYHGGMGDSERNRNQDEFLMDNYNTMIATNAFGMGIDKSNIR
NIIHFSIPKNIESYYQEIGRGGRDGERCNCHLLYSREDIYSVEYLINTTSLINRREIELR
KLNELLSLCEYDGCYKSFILNYFGEKDIKSYCNSCSNCFNNDELIDFTVEAQKILSCVYR
TKESYGISVLVDILRGVRGPKIVQNQLINVSTFGIMKEYSSGYIKDIINKLLEEKYVLLK
EGTYSILKLNDESVKILKGTQKVMLKIEKRELTVCQDEELFKVLRLYRKDKAKLENVKPY
ILFSDKTLIEIANKKPNSFEQLLEIQGIGERKIKNYGRDILNIVNRREVH
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaagagtaggatagaagaagttttaaataaggtttatggatatagtagcttt
agaaatgggcagtgggaactaataaataatatattaaacagaagagatacttttgggata
cttccaacaggagctggaaagtctatatgttatcagattcctgcgcttatttttgaaggt
ataaccatagtgatttctccgctaatctctcttatgaaaaatcaggtggactctttgaga
gctgttggcattgacagtatttatataaattcttctatgagtatagatgaaattagaaaa
gttgagatagatataataaaaggcaaatataaaataatatatatagcgccagaaagattg
tcttctaactatactattaaattgtttagtaacttaatggtttctcaagttgtgatagat
gaagcacattgtgtatctcaatggggacatgattttcggaaaagttataaagacatagca
ccttttataaaaagtttaaattcagatccagtaatatcagcatttacagcaactgcaaca
agagaagttagagaggactctgttaatcttttagagttaaggaacccatatatttatata
ggcagttttaatagagagaatttgattataaatatacataaagaaatagataaattagag
tttataaaagattgtataagagatatagacgaaagttcaattatatattgtttaactaaa
aaagaagttgatggattatacatatatttaaaagatttaggtttctctgtttgtaaatat
catggtggtatgggtgatagtgaaagaaataggaatcaagatgagttccttatggataat
tataatactatgatagcaactaatgcatttggtatgggaatagataaatctaatattagg
aatataatacatttttcaattcctaaaaatatagaaagctattatcaagaaataggacga
ggaggaagagatggtgaaaggtgtaattgtcacttattatattctagagaggatatttat
tcagtagaatatttgattaatacaactagccttattaataggagagagattgaacttaga
aaacttaatgagctattgtctttatgtgaatatgatggatgttataagtcttttatatta
aattattttggagaaaaagatataaaaagttattgtaatagctgttcaaattgttttaat
aatgatgagctaatagactttactgttgaggctcaaaagatactttcatgtgtatataga
actaaagaaagttatggtatatctgtacttgtagatattttaagaggggttagaggccct
aaaatagttcaaaatcagctgattaatgtatctacttttggaataatgaaggaatattcc
agtggatatataaaagatataataaataaactgcttgaagagaaatatgttttattaaaa
gaaggtacatattcgattctaaagcttaatgatgaatcagtaaagatattaaagggaact
cagaaagtaatgcttaaaatagaaaaaagagagcttactgtatgtcaggatgaagaactg
tttaaagtacttagactgtatagaaaagataaagcaaaattagagaatgtaaagccatat
atattatttagtgataaaacgttaatcgaaatagctaataaaaaacccaatagttttgaa
caattactagaaattcaaggcattggggagcggaaaataaaaaactatggtagagatatt
ttaaatattgttaatagaagagaagttcattaa
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