Clostridium intestinale: HZF06_06195
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Entry
HZF06_06195 CDS
T08934
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cint
Clostridium intestinale
Pathway
cint03420
Nucleotide excision repair
cint03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HZF06_06195
03430 Mismatch repair
HZF06_06195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cint03400
]
HZF06_06195
Enzymes [BR:
cint01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZF06_06195
DNA repair and recombination proteins [BR:
cint03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HZF06_06195
MMR (mismatch excision repair)
Other MMR factors
HZF06_06195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
AAA_11
SLFN-g3_helicase
GPS2_interact
ResIII
AAA_30
NACHT
CbiA
Motif
Other DBs
NCBI-ProteinID:
QLY82294
UniProt:
A0A7D7A152
LinkDB
All DBs
Position
1324033..1326315
Genome browser
AA seq
760 aa
AA seq
DB search
MHKDFNEEQEILKQKIHRVDREIKKREDEEEKFKDKIALLKKAAKGSYNLELENTKIIYD
IVNKNLQNYKESIVNPYFGRIDFKEDKKIPESLYIGKHGIYSSEDGEEIVIDWRAPISDL
YYSGTEGEAYYRSPIGVISGKLLLKRKFLIKDGELEKIFDEGINEIILKGEEVDQENQLV
DEFLKINLEESAGSKLKEVVATIQREQNDIIRAPLNFPIIVQGSAGSGKTTIALHRLAYL
VYRYNEKITGKDILVLAPNKLFLDYISEILPNLGTYDVNQKTFALLGKDYLNFKSKVYSR
DDKLKEILEGDPEKSKLIKNSSKVKGSLVFKVILDRLITIWERESQNLKDIKVQGFTLYN
EKEIKRLYFKDLVHFPVNKRIEEIYKYFKKKLDNTLVKIYEQLDLFYDLKINKIKKTNED
SKERRERLINIYNQRDEIKNNLKKESLVKLKEYFETWNSSSGEGLYYRLFEDEEIFNEAT
GGKIPKVLADFMKEEVLSNRDKNIIDEDDIAPLLYLKFKTEGVKEENKFKHIVIDEAQDY
SPLMFIVSKMLSIGSSMTIVGDLGQGIYSYKGIDSWDGLIRDVFEGDCTYISLSQSYRST
IEIIDFANEVLRKQENAPKPAKAVIRRGPKPQLIKFSNYKELASTIDNLVEEITSTNKKS
IAIICKTFRDCKKLRDRIKAYSKTQWTLVKEGDSELDVTNIILPSYLTKGLEFDCTIIYD
VSKDVYKDSEEDKKLLYVALTRALHNEYVIYNDEVSELIE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcataaagattttaatgaagaacaagagattttaaaacaaaagattcatagagtagat
cgtgaaataaaaaaaagagaagatgaagaagaaaagtttaaggataaaatagcactttta
aaaaaagcagctaagggcagttacaacttagaactagaaaatacaaaaataatatatgat
attgtaaataaaaatcttcagaattataaagaatctatagttaatccttattttggaagg
attgattttaaagaagataaaaaaatacctgagagtctttatataggtaaacatggaata
tatagttccgaagatggagaagaaatagtaatagactggagagctcctatatcagatctt
tattatagtggaactgagggtgaagcctattatagatcacctattggtgtaataagtgga
aagctattattaaagaggaaatttttaataaaagacggtgagcttgagaagatttttgat
gagggaataaatgagattatattaaaaggtgaagaagtagatcaggaaaaccaactagtg
gatgagtttttgaagattaacctagaggagagtgctggtagcaaattaaaagaagttgtg
gcaacgattcaaagagaacagaacgacataattagagctccactaaacttccctataatt
gttcaaggatcagctggatctgggaaaactactatagctttacataggttagcttatttg
gtgtatagatataatgaaaaaataacaggaaaagatatattggttttagcacctaataag
ttatttttagattatatatcagagatacttccaaacttaggaacctatgacgttaatcaa
aaaacttttgcactattaggtaaagactacttaaactttaaaagtaaagtgtattcaaga
gatgataagttaaaagaaatccttgaaggtgatccagaaaaaagtaaactaatcaaaaat
tccagtaaagtaaaaggttctttagtatttaaggttatactagatagacttataaccata
tgggaaagagagtcacaaaacttaaaggatataaaggttcaagggtttacattatataat
gaaaaagaaataaagagattatattttaaagatttagtacactttccagtaaataaaaga
atagaagaaatttataagtattttaaaaagaaattagataatacactggtgaaaatatat
gaacagctggatttattctatgatttgaaaataaataaaataaaaaagactaatgaggac
tctaaagagagaagagaaagattaattaatatatataatcaaagagatgagataaaaaat
aatcttaaaaaagaatctttggtgaaacttaaagaatattttgagacatggaacagctcc
agtggagaaggtctatattacagactttttgaagatgaagagatattcaatgaagctact
ggtggaaaaatacctaaagtattggctgattttatgaaggaagaagttttaagtaacaga
gataagaatataatagatgaagatgatatagcccctcttttatatttaaaatttaagact
gaaggtgttaaagaggagaataagtttaaacatatagtaatagatgaagcacaggactac
tcgccacttatgtttatagtttcaaaaatgttgtctataggaagctctatgacaatagta
ggagacttaggacaaggaatatatagctacaaaggtatagacagctgggatgggttaatt
agggatgtatttgaaggtgattgcacttatatatcattaagccaaagctatagaagtact
attgaaataatagattttgctaatgaagttttaaggaaacaagaaaacgctcctaaacca
gctaaggcagttataagaagaggaccaaaacctcagttaataaaatttagtaattataaa
gaacttgcatctactatagacaatttagtagaggaaataacttcaactaacaaaaaatct
atagctataatttgtaaaacctttagagattgcaaaaagcttagagatagaataaaagcc
tatagcaaaactcagtggactttagtaaaagaaggagatagtgagttagatgtaactaat
ataatactgccatcctatctaactaagggattagaatttgattgcactataatatatgat
gtatcaaaagatgtctacaaagatagtgaagaagacaaaaagttattgtatgtagcatta
actcgtgcgcttcacaatgagtatgtaatttataatgatgaagttagtgagttgatagag
taa
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