Clostridium intestinale: HZF06_10550
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Entry
HZF06_10550 CDS
T08934
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cint
Clostridium intestinale
Pathway
cint02024
Quorum sensing
cint03060
Protein export
cint03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HZF06_10550 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HZF06_10550 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HZF06_10550 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cint02044
]
HZF06_10550 (ffh)
Enzymes [BR:
cint01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HZF06_10550 (ffh)
Secretion system [BR:
cint02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HZF06_10550 (ffh)
Eukaryotic Sec-SRP protein
HZF06_10550 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
AAA_17
AAA_31
ATPase
AAA_30
APS_kinase
SRPRB
nSTAND3
AAA_16
ATP_bind_1
ParA
ArsA_ATPase
MMR_HSR1
AAA_14
AAA_18
ResIII
AAA_25
KAP_NTPase
AAA_33
6PF2K
NPHP3_N
TsaE
cobW
Motif
Other DBs
NCBI-ProteinID:
QLY82000
UniProt:
A0A7D7A6G8
LinkDB
All DBs
Position
2143744..2145117
Genome browser
AA seq
457 aa
AA seq
DB search
MAFEGLSEKLQDALKKLRGKGKLNEKDIKEAMREVKLALLEADVNFKVVKSFISKVSEKC
VGEEVLGSLTPGQQVIKIVNDELTELMGTAESKISYADAGPTVIMLVGLQGAGKTTMCGK
LALSLRKKNKKPLLVACDVYRPAAIKQLEVVGKSIDIPVFTMGDKISPVDIAKAGIASAR
ENGNNIVIIDTAGRLHIDETLMEELQDIKSGVKPNEILLVVDSMTGQDAVNVAETFNSSL
DISGVILTKLDGDTRGGAALSIRSMTQKPIKFVGVGEKMSDLEVFYPDRMASRILGMGDV
LSLIEKAQAAIDTEDAEALSKKMLTSDFNFEDYLMAMEQMNKLGPINKVLEMIPGMNSKQ
LEGVDLEAGEKQMARSKAIIQSMTSKERRNPQLVSSSSSRKKRIANGSGTSIQELNKLLK
GFEAMRKQMKQFKGLTQNMKKGKKGKNGLFGNLPFLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaaggtttatcagaaaagttgcaagacgctttaaaaaagctaagaggaaaa
ggaaaattaaatgaaaaagatataaaagaagccatgagagaagttaagcttgctctatta
gaagcagatgttaactttaaagtagtaaaatcttttatatcaaaagttagtgaaaaatgt
gttggagaagaagttttaggaagtttaactccaggacaacaagtaataaaaatagttaat
gatgaattaacagaactaatgggtacagctgaaagcaagatatcttatgcagatgcaggc
ccaacagttattatgcttgtaggacttcaaggggcaggtaaaactaccatgtgtggtaag
ttagctttatccttaagaaagaaaaacaaaaaacctctattagtagcttgcgatgtttat
agaccagcagctataaaacaacttgaggttgtaggtaaaagcatagatattccagtgttt
actatgggagataagataagtccagtagatatagctaaagctggtatagcaagtgcaaga
gaaaatggtaataacatagttataatagatacagcaggtagacttcatatagatgaaact
cttatggaagaactacaagatataaagtcaggagtaaaacctaatgaaatattattagta
gtagactctatgacaggacaggatgcagtaaatgtagctgaaacctttaatagctctcta
gacatatcaggagttattttaacaaaacttgatggtgacacaagaggtggagctgcactt
tctataagaagcatgactcaaaaaccaattaaatttgttggtgttggggaaaaaatgagc
gacttagaagtattctatccagacagaatggcatcaagaatattaggaatgggagatgta
ttatctcttatagagaaagctcaagcagctatagacactgaagatgcagaagctttatca
aagaaaatgttaacttcggactttaactttgaagattacttaatggcaatggaacaaatg
aataagttaggtcctataaataaagttttagaaatgatacctggaatgaattctaaacaa
cttgaaggagttgatttggaagctggagaaaagcaaatggctagatctaaagctataatt
caatccatgacatcaaaagaaagaagaaatccacagcttgtttcatcatcttcatctaga
aagaagagaatagcaaatggctcaggaacaagtatacaagaacttaataaacttcttaaa
ggtttcgaagctatgagaaaacaaatgaaacaatttaagggtttaactcaaaatatgaaa
aaaggtaaaaaaggcaaaaatggattatttggaaatcttccctttttgaaatag
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