Clostridium intestinale: HZF06_10605
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Entry
HZF06_10605 CDS
T08934
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cint
Clostridium intestinale
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cint03032
]
HZF06_10605 (topA)
03400 DNA repair and recombination proteins [BR:
cint03400
]
HZF06_10605 (topA)
Enzymes [BR:
cint01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HZF06_10605 (topA)
DNA replication proteins [BR:
cint03032
]
Prokaryotic type
DNA Topoisomerases
HZF06_10605 (topA)
DNA repair and recombination proteins [BR:
cint03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HZF06_10605 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QLY82011
UniProt:
A0A7D6W3N6
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All DBs
Position
2152285..2154375
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AA seq
696 aa
AA seq
DB search
MGQNLVIVESPAKAKTIGKYLGKNYIVEASMGHLRDLPKSQLGVDVDNEFSPKYITIRGK
GDLLDKLKKLAKKSDKVYLATDPDREGEAISWHLAHILKIPSTEKCRIEFNEITKEAVKG
SIKKSREINQNLVDAQQARRILDRLVGYEISPILWKNIKWGLSAGRVQSAALKLICDREE
EIKAFVPKEYWTVECKLIKDKKKFPVNLVQYKNKKLEISTEDEADKVIKDLKSGNYVVKD
VKKADKQKNPLPPFTTSTLQQDANKKLNYMTKKTMMIAQQLYEGVEIKGHGTIGLITYMR
TDSVRISSEAQEKALDFIKGAYGEKYAPDKPRVYRGKKNIQDAHEAIRPTYIEITPEIAK
ENLTNDAYKLYSLIWKRFVASQMSSCLLNTNTITITNGDYKLRATGSIVKFEGFMKIYEY
STEEENQDVLLPELEKDEVLEEDSLTPKQHFTQPPSRYTEASFVKLLEEKGIGRPSTYVP
TISTLTSSRNYVVRDKKQLVPTELGFIVNNIMSEYFKEIVDTDFTAEMELKLDSVEEGTE
NWTKIVGEFFTPLKTSLEKAESEMSKIVLEDKVSDVPCDKCGRMMVIKHGRFGDFLACPG
YPECQNTKPIVHEVDAPCPKCGGKVLLKRSKKGNKFYGCSNYPECDFVSWHEPAKEKCDK
CGSFMVYRFSKAKGKYLECTNGECKNKVPLKSEEKE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaaatttagtaatagttgagtcgccagctaaagccaaaaccataggaaagtat
ttgggaaaaaattatatcgttgaagcatcaatgggacatttaagggacttaccaaagagt
caattaggagttgatgtagataatgaattttctcctaagtatataacaataagaggtaaa
ggtgatcttttagataaattaaagaagttagccaaaaaaagtgataaagtatatttggca
actgaccctgatagggaaggagaagctatttcttggcatttagctcacatattaaagata
cctagtactgaaaagtgtagaattgagtttaatgagataacaaaggaagctgttaaaggc
tcaataaagaaatcgagagaaataaatcaaaatttagtagatgctcagcaagcaagaaga
attttagatagacttgtggggtatgaaataagccctatactttggaaaaatattaaatgg
ggtttaagtgcaggaagggttcaatctgctgcattaaaattaatttgtgatagagaagaa
gagataaaagcatttgtacctaaagaatattggacagtagaatgtaaattaataaaagat
aaaaagaagtttcctgtaaatcttgttcaatataaaaataaaaaattagaaataagtact
gaagatgaagctgataaggtaattaaagatttaaaatctgggaattatgttgtaaaggat
gttaaaaaagcagataaacaaaaaaatccactaccgccttttacaacttccactttgcag
caagatgctaataaaaaactaaactatatgacaaagaaaacaatgatgatagctcaacaa
ctttatgaaggagttgagataaagggtcatggaactataggtttaattacctatatgaga
acagattctgtaagaatatcaagtgaagctcaggaaaaagctttagattttataaaagga
gcttacggagaaaagtatgctccagataaacctagagtatatagaggtaaaaagaatatc
caagatgctcatgaagctataagaccaacatatatagaaattactcctgaaatagcaaaa
gaaaatcttacaaatgatgcgtataagctttatagtctaatatggaagagatttgtagca
agtcaaatgagttcttgtttattaaataccaataccataaccataactaatggcgattat
aaattaagagcaacaggctcaatagttaagtttgaaggatttatgaagatatatgagtat
agtacagaagaagaaaatcaagatgtattacttccagagttagagaaggatgaggtgtta
gaggaagattccttaactccaaaacagcattttactcaacctcctagtagatacactgaa
gcgtcttttgttaaattactagaggaaaagggaatcggaagaccaagtacctatgttcca
actatatcaacattaactagtagtagaaactatgttgtgagagataaaaaacaattagtt
cctacggaattgggttttattgttaataatataatgtctgaatattttaaagaaatagtt
gatacagattttacagctgaaatggaacttaagctagattctgtagaagagggaacggaa
aattggactaagattgttggtgagttttttactccattaaagacatcgcttgagaaagct
gaaagtgaaatgtctaaaatagttttagaagataaggtgtctgatgtaccatgtgataaa
tgtggaagaatgatggttattaagcatggtagatttggtgactttttagcttgtcctggc
tatccagagtgtcaaaatacaaaacctatagtacacgaagttgatgcgccttgccctaaa
tgtggggggaaggtattacttaaaagaagtaaaaagggcaataaattctacggttgttct
aactacccagaatgtgattttgtaagttggcatgaaccagctaaagagaagtgcgataaa
tgtggatcatttatggtatatagattctcaaaagctaaaggtaaatacttggaatgtact
aatggagaatgtaaaaataaagttcctctaaagagtgaagaaaaagaatga
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