Clostridium intestinale: HZF06_10760
Help
Entry
HZF06_10760 CDS
T08934
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cint
Clostridium intestinale
Pathway
cint03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZF06_10760 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cint03019
]
HZF06_10760 (rny)
Messenger RNA biogenesis [BR:
cint03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HZF06_10760 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
OmpH
KH_2
Motif
Other DBs
NCBI-ProteinID:
QLY82327
UniProt:
A0A7D6VSW4
LinkDB
All DBs
Position
2187661..2189193
Genome browser
AA seq
510 aa
AA seq
DB search
MKLILIDIVVLVCLAGVQYIIINKVSKNKIDNLEKEANDLLENSKKEVDSLRKEAILEAK
EEVHRLRTDVEKESRERRNEVQRLERRLIQREESLDKKGEILEKKEETINKRLQDIDLME
VNAQEILVKRRHELEKVSGLTSEEAKQILLDEISREIKHESAMMIKDVEMKAKEEADKKA
REIITTAIQRCAADHVSETTVHVVALPNDEMKGRIIGREGRNIRTLETLTGVDLIIDDTP
EAVILSSFDPIRREVARIALEKLIVDGRIHPARIEEMVERATKDVENDIKEEGEQATFET
GVHGLHPEIIKLLGRLKYRTSYGQNVLKHSIEVAYLAGLMASELGLDVNIARRAGLLHDI
GKAVDQEYEGPHALIGGDLAKKYHESPVIVNAIAAHHGDVEMISLEAILVQAADAISAAR
PGARRETLEAYIKRLEKLEEIANSYEGVEKSYAIQAGREIRIMVKPDQVDDAVAIEMARN
IVKNIEEQLEYPGQIKINVIRETRAVEYAK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttattttaatagatatagtggttctagtttgtttagctggagtacaatatata
ataatcaataaagtttcaaaaaataaaattgataatttagaaaaagaagcaaatgatctt
ttggagaattccaaaaaagaagtagattccttgagaaaagaagctattttagaggctaaa
gaagaggttcatagattaagaaccgatgttgaaaaggaatcaagagaaagaagaaatgaa
gtacaaagattagaaagaagattaatccaaagagaggaatctcttgataaaaagggtgaa
atcttagaaaaaaaagaagaaacaattaataaaagattacaagacattgatttaatggaa
gtaaatgctcaagaaattttagttaaaagaagacatgaattagaaaaggtttctggatta
acatctgaagaagcaaaacaaattcttcttgatgaaattagtagagaaatcaaacatgaa
agtgcaatgatgataaaagatgtagaaatgaaagctaaagaagaggcagataaaaaagcc
agagaaataattactacagctattcaaagatgtgcagcagatcatgtttctgaaacaaca
gtacatgtagtagcgcttccaaatgatgaaatgaaaggtagaataataggaagagaaggt
aggaatataagaaccttagaaaccttaactggagtagatttaataattgatgatactcct
gaggcggtaatactttctagtttcgacccgataagaagagaagttgcaaggatagcatta
gaaaaattaatagtagatggacgtattcatcctgctagaattgaagaaatggtagaaaga
gctactaaagatgtcgaaaacgatataaaagaagaaggagaacaagctacctttgaaaca
ggggtacatggtttacatcctgagattattaaattgttaggtagattaaaatacagaaca
agttatggtcaaaatgttttaaaacattccatagaagttgcttatttagcaggtttaatg
gcttcggaattaggcttagatgtaaatatagcaagaagagctggattattacatgatata
ggaaaagctgtggatcaagagtatgaaggcccacatgcgttgataggtggagacctagct
aagaagtatcatgaatccccagtaatagtaaatgctattgctgctcatcatggtgatgtg
gaaatgatatctctagaggcaatattagttcaggctgcagatgctatttcggcagcaaga
ccaggtgctagaagagaaactttagaagcttatataaagagattagaaaaattagaagag
attgcaaactcatatgaaggtgtagaaaagtcatatgctattcaagctggaagagagatt
agaatcatggttaaaccagatcaagtcgatgacgctgtagctattgaaatggcacgtaat
atcgtaaagaacatagaagaacagctagaatatcctggccaaattaaaataaatgtgatt
agagagacacgtgctgtggaatacgcaaaataa
DBGET
integrated database retrieval system