Clostridium intestinale: HZF06_12780
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Entry
HZF06_12780 CDS
T08934
Symbol
lsa
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
cint
Clostridium intestinale
Pathway
cint02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HZF06_12780 (lsa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cint02000
]
HZF06_12780 (lsa)
01504 Antimicrobial resistance genes [BR:
cint01504
]
HZF06_12780 (lsa)
Transporters [BR:
cint02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
HZF06_12780 (lsa)
Antimicrobial resistance genes [BR:
cint01504
]
Gene variants
Macrolide resistance genes
Transporters
HZF06_12780 (lsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
KAP_NTPase
AAA_29
AAA_22
RsgA_GTPase
Dynamin_N
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QLY77976
UniProt:
A0A7D6VLQ0
LinkDB
All DBs
Position
complement(2546855..2548333)
Genome browser
AA seq
492 aa
AA seq
DB search
MSLINVTNLTFSYEGSYDNIFENINFQIDTDWKLGFTGRNGRGKTTFMNLLLGKYEYRGG
ISSSVNFEYFPYEVKEKENFTIDVIKEISPNSMDWEIEKELSLLEVDYDVLYRQFFTLSN
GEQTKVLLAGMFLKENSFLLIDEPTNHLDSEARKMLSKYLNKKKGFILISHDRAFLDNCV
DHILAINKTNIEIQKGNFTSWWENKELQDGFELAENEKLKKDIGRLSKSAKRTSSWSDNV
ESSKFGSTNSGSKVDRGYIGHKAAKMMKRAKNIESRQQNMIEEKSKLLKNIETNESLKIS
PLSFHDNKIVELIDVSINYDDKSVCEGISFSIEQGERIAIQGKNGSGKSSILKLINGEDI
SHTGVIRKNNQLTISYVSQDTSTLVGNLSEYAYENSIDESLFKSILRKLDFSREQFEKKI
EDFSGGQKKKVLIARSLCEKAHLYIWDEPLNFIDVISRMQIEDLLLEYKPTILFVEHDIA
FCENVATRIIKL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaataaatgttacaaatcttaccttcagctatgaggggagttacgataatatt
tttgagaatattaattttcaaattgatactgattggaagttaggttttacaggcaggaat
gggcgtggaaaaacaacctttatgaaccttttactgggaaaatatgagtatagaggaggt
atttcttctagcgttaattttgagtattttccatatgaagttaaggaaaaagaaaacttt
actatagatgttataaaggaaatcagccccaattcaatggattgggaaatagaaaaagaa
ctatcgctattagaagtggactatgatgttttatatagacagtttttcacactatcaaat
ggtgaacaaacaaaagtattacttgctgggatgtttctaaaagagaattcatttctactt
attgatgaacctacaaatcatttagattcagaagctagaaaaatgctaagtaaatatcta
aataaaaagaaaggttttatcttgatttcacatgatagggcatttttggataattgtgtt
gatcatattttggctattaataaaactaatattgagattcaaaaaggaaattttacttct
tggtgggaaaataaagaactacaagatggatttgagttagcagaaaatgagaaactaaag
aaagatataggtagactgtctaaatcagcaaaacgtacatcctcatggtcagataatgta
gaaagcagtaagtttggaagcactaattctggaagtaaagtggatagaggatatattgga
cataaggcagccaagatgatgaaacgtgctaaaaatatagaatctagacaacaaaacatg
atagaagaaaagtcaaaactacttaaaaatattgaaactaatgaaagtttgaaaatatcg
ccacttagctttcatgataataaaatagttgaactaatagatgtttcaattaactatgat
gataagagtgtttgtgaaggaataagctttagcatagaacagggtgaaagaatagctatt
caaggtaaaaatggtagtgggaaatccagtatattaaaattaattaatggcgaagatatt
tctcatactggagttataagaaaaaataatcaattaaccatttcatatgtatcacaagat
acatcaactttagttggaaatttgtctgagtatgcctatgaaaatagcattgatgagagt
ttatttaaatctattcttagaaaacttgatttttcaagagagcagtttgaaaagaaaata
gaggattttagtggtgggcaaaagaaaaaggtattgattgcaagaagtttatgtgaaaaa
gcacatttatatatttgggatgaacctctaaactttatagatgtaatttcgcgtatgcag
attgaagatttattacttgaatacaaaccaacaattctttttgtggaacacgatattgct
ttttgtgaaaatgtagcaactagaataataaaattataa
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