Clostridium intestinale: HZF06_18405
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Entry
HZF06_18405 CDS
T08934
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cint
Clostridium intestinale
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cint03019
]
HZF06_18405
03009 Ribosome biogenesis [BR:
cint03009
]
HZF06_18405
Messenger RNA biogenesis [BR:
cint03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HZF06_18405
Ribosome biogenesis [BR:
cint03009
]
Prokaryotic type
rRNA processing factors
HZF06_18405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
QLY79036
UniProt:
A0A7D6VNC9
LinkDB
All DBs
Position
complement(3680999..3682426)
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AA seq
475 aa
AA seq
DB search
MRAIFIERSEDILRIAIKENSELTECFVEEETKEPLPGEIYKGIVKSIVPAIKCAFVDIG
YEKNAFMSLSKEIRLKQGDEIVVEVIKEAIGDKGPKVIMDFSLPGKYSVINSKGKVINIS
KRIEDENRKAELLNNIKSFEDAAITIRTSGAYCEIESIINELDELYEEYKTIKQKAKYHK
NPQKLYGDNPLLHKILRDKMDKKTKKIYVNKEEDYKVVLKYLEEKQEIQVELYDQKRTLF
DFYGIEREILSLRHNKVSLNCGGYIVIDKTEAMYVIDVNSGKNTKGKNREKTGEETNKEA
AKEIARQIRVRNLAGIILIDFIDITSEESKKEILDILRSELESDKNRTQVFPFTELNLVQ
ISRKRSGRSIFDMIEEKCLTCNGMGERLALSYVSILIRNDILKFNGENSISDFYIQINSQ
YESLIKEDLFKFLTKIEALDCNIYINYVDEVEYFKVEPLLFKNQIENVEKYLITL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagggcaatatttatagaaagaagcgaagacatattaagaatagctattaaagaaaac
agtgaattaactgagtgttttgtagaagaagaaaccaaagaaccactacctggagaaatt
tacaaaggaatagttaagagtatagttccagctattaaatgtgcatttgtagatataggt
tatgagaaaaatgcttttatgagcttaagtaaagaaattcgacttaaacaaggggatgaa
atagtagtagaagtaataaaggaagctattggagacaaagggccaaaggttattatggat
ttttcattgcctgggaaatattcagttataaactctaaaggaaaagtgataaatatttct
aaaagaatagaagatgaaaatagaaaagctgaattgcttaataatataaaatcctttgaa
gatgcagcaattacaataagaacaagtggagcttattgtgaaatagagagtataataaat
gaattagatgaactatacgaagagtataaaacaataaaacaaaaagctaagtaccataaa
aatcctcaaaaactatatggtgataatccattattacataaaatcttaagagataaaatg
gataaaaaaactaagaagatatatgtaaataaagaagaggattataaagttgttttaaag
tatctagaggaaaaacaagaaattcaggttgagctatatgatcaaaaaagaaccttattt
gatttctatggaatagagagggaaatactttccttaagacataataaagtcagtcttaac
tgcggtggatatatagttatagataagacagaagctatgtatgttatagatgtaaactct
ggaaaaaacactaagggtaaaaatcgtgaaaaaactggagaagaaactaataaggaagca
gcaaaagaaattgcaagacagataagagtaagaaatctagctggtataatccttatagac
tttatagatataacaagcgaagagtctaaaaaagaaattttagatattttaagaagtgaa
cttgagagtgataaaaatagaactcaagtatttccatttacggagcttaatttagtccaa
atttctaggaaaagaagtggcagaagcatattcgatatgattgaagagaaatgtttaacc
tgcaatggtatgggagaaagactggcactttcttatgtaagtatattaataagaaatgat
atattaaagtttaatggagagaactctattagcgatttttatatacaaataaactctcaa
tatgaatctttaataaaagaagatttatttaagtttttaactaaaattgaagcattagat
tgcaacatctacataaactatgtagatgaagttgaatacttcaaagttgagcctctttta
tttaaaaatcagatagagaatgtagaaaaatatttaattaccttataa
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