Clostridium intestinale: HZF06_19990
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Entry
HZF06_19990 CDS
T08934
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cint
Clostridium intestinale
Pathway
cint03420
Nucleotide excision repair
cint03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HZF06_19990 (pcrA)
03430 Mismatch repair
HZF06_19990 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cint03400
]
HZF06_19990 (pcrA)
Enzymes [BR:
cint01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZF06_19990 (pcrA)
DNA repair and recombination proteins [BR:
cint03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HZF06_19990 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HZF06_19990 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QLY79298
UniProt:
A0A7D7A2H7
LinkDB
All DBs
Position
complement(3986611..3988893)
Genome browser
AA seq
760 aa
AA seq
DB search
MDLKKLLNKEQYEAATTIEGQVLILAGAGSGKTRVLTHRIAYMIEDKGIAPYNILAITFT
NKAAGEMKERVKALIGDEAENMWISTFHSSCVRILRREIEKLGYKKDFTIYDSYDQKSLV
KQCMKELNINDKDIEEREVLSKIGKAKDDLKKPSSVTLESQGNYREEKIAQVYELYQKKL
KENNALDFDDLIFKTVELFRKEPEALEFYQRKFRYIMVDEYQDTNKAQYEFIKLLAKKNK
NICVVGDDDQCIYAWRGADIRNILDFEKDYPECKTVKLEQNYRSMGNILEAANFVIRNNS
ERKSKILRTEAEKGEKIKIYRAFSDMDESNFAATTIENGRKDDRKYRDFAVLYRTNAQSR
IFEDTFIKRGIPYRLIGGLKFYDRKEIKDILAYLKVINNPADSVNLRRIINVPKRSIGDA
TVDKVLQFAADNEMSLFDSLIEAENISSLTPRNITVLNKFTTLMEELIEYSESMPISNLI
EDILKNTGYLKELKESNNPEDLSRVENLEELVSAAVDFEKNEEDNSLAAFLEKVALVQDV
DNFDEEADSVTLMTIHSAKGLEFPVVFMVGMENGLFPGPSSFNSESEMEESRRLCYVGIT
RAREFLYMTSAEVRRVFGRTVAYPQSDFIAEIPTELREYVNVTKHSGTLAGGKSAYANYN
ISGGNPHTLRNSYGNNASKGNKFISSAEATKKLNNILNEDSEKMLTKGESTLGRKVKHPK
FGIGTIVKAIEVDDDVKITIAFDSQGIKTLLLSMASLELL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaaaaagttattaaataaagagcaatatgaagcagctaccactatagagggg
caggttcttatattagcaggagcaggttcaggaaaaactagagttttaactcatagaatt
gcatatatgatagaagataaagggatagcaccatataatattttggctataacatttaca
aataaagcggctggagaaatgaaggaaagagttaaggctttaattggagatgaagcagaa
aatatgtggatatctactttccattcatcttgtgtaaggattttaaggagagaaatagaa
aagttaggatacaaaaaggattttactatttatgattcctacgaccaaaagtctttagtt
aagcaatgtatgaaagaacttaacataaatgataaagatatagaagagcgtgaagtctta
tctaaaataggtaaagctaaggatgacttaaaaaaaccatcctctgtaactttagagagt
caaggtaattatagagaagaaaaaatagctcaagtttacgaattatatcagaaaaaatta
aaagaaaacaatgctttagactttgacgacttaatttttaaaacagtagagttatttaga
aaagagcctgaagctttagaattttaccaaagaaaattcagatatataatggtggatgaa
tatcaagatactaataaagcccaatatgaatttattaaacttcttgcaaagaagaataag
aatatctgcgttgttggggatgatgatcaatgcatctatgcttggcgtggtgcggatata
agaaatatattagattttgaaaaagattatccagagtgtaaaactgttaagttagagcaa
aactacagaagtatgggtaatatattagaggcggctaattttgttataagaaataatagt
gagagaaaaagcaagattttaagaacagaagctgaaaaaggagaaaaaataaaaatatat
agagctttttcagatatggatgaaagtaattttgcagccacaactattgagaacggtaga
aaagatgatagaaaatatagagattttgcagtgctttatagaactaatgcacaatcgcgt
atatttgaagatacttttataaaaagagggattccttatagattaattggtggtcttaag
ttctatgatagaaaagaaattaaggatattttagcttatttaaaggttattaataaccca
gcagattctgtaaatcttagaagaataattaatgttcctaaaagaagtataggggatgca
actgtagataaggtattgcaatttgcagctgacaatgaaatgagtttattcgattcatta
atagaagcagaaaatatctcaagcttaacacctagaaatattactgttctaaataagttt
actacattgatggaagagcttatagaatatagcgaaagtatgcctatatctaatttaatt
gaagatattttaaagaatactggatatttaaaagagcttaaggaatcaaataatccagag
gatttaagcagggttgaaaacctagaggaattagtttcagcagcggtggattttgagaaa
aatgaagaggataattctttagcagccttccttgaaaaggtggctttagttcaagatgta
gataattttgatgaagaggcagattctgtaactttaatgactatacattcagctaaagga
ctagagtttccagtagtatttatggttggtatggagaatgggttattcccagggccatct
tcctttaattctgaaagcgagatggaggagtctagaagactttgttatgttggaattact
agagcaagagaatttctatatatgacgtcagcagaggttagaagagtttttggtagaact
gttgcttatccacaatcagattttatagcagaaatccctacagaattaagagagtatgtt
aatgttactaaacactcagggacacttgcaggaggtaagtctgcatatgctaattacaat
ataagtggaggcaatccacatactctaaggaattcttatggcaataatgcttcaaaaggt
aataagtttattagctctgcagaagctactaagaagttaaacaatattctaaatgaagac
tcagagaagatgctgactaaaggtgagtccactttaggaagaaaagttaaacatcctaaa
tttggtataggtaccatagttaaagctattgaagtagatgatgatgttaagattactatt
gcatttgattcacaaggaataaaaacactattacttagcatggcttctttagaattgtta
taa
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