Clostridium intestinale: HZF06_21045
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Entry
HZF06_21045 CDS
T08934
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
cint
Clostridium intestinale
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_8
PTS-HPr
HTH_50
PAS_9
PAS_GdpP
PAS_4
AAA_5
PAS_10
AAA
HTH_8
AAA_2
Mg_chelatase
MCM
AAA_7
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QLY79490
UniProt:
A0A7D6VTH4
LinkDB
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Position
4207479..4209482
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AA seq
667 aa
AA seq
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MYTKSISILDPNGLHTRIAAMIVNKVDKLKSKHNVNLYIQKPPKTDWLGVSMLALLSLKV
HYKESINIGVKEHTEAATAALDELYSYILTKVNLNSSMMEQIDVFIEESKIANEQILDSI
PIGIVVIDLNSNITYINDYALKVFEKEHVKSIGKSIEKIVHNTKLPNIIANPQKQFGQIQ
HINGKIITVNRSPIFNNSKLIGACGVFQDVSDIVGMKELNEKFKKILESSHDLICFVDEN
GFINYTNPAYVNYLGDSSNYLGKSIFDISQDGLRVKVFNTKERVENVVHTKNNIDIISTV
TPLFIDGEFKGVLSTSKVISEMKDLVNKLELSEEQLKYYKEELLKHTLNSKAFSGIIGIS
SSLKDILYISQKASESTSTVLIRGDSGTGKELIASAIHQNSNRNNKPFIKVNCAAIPDNL
LESELFGFEKGSFTGAIKSKPGKFTIADGGTIFLDEIGDMPLSMQVKLLRVLQEREVESI
GGIAPQKIDVRVIAATHRNLEEMIKNGEFREDLYYRLNVLCIQLPPLKDRKEDIPDLVEF
FIHKMNSRLNKNIKGITKEALNHLINYSWPGNIRELENIIERAINLSSRDIITPRDLPYY
FREDGKHKESLLPLDQDELLTFEEYEKIIIEKAMKVYGSYNKAGKALGLTHRTISLKCKK
YGIEVNK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtatacaaaatctatatcaattttagaccccaacggacttcatactagaattgcagcc
atgatagttaataaagtagataagctaaaatctaaacataatgttaatctttatattcaa
aagccacctaaaactgactggcttggagtttctatgcttgctctactttctttaaaggtt
cattataaagaatctataaatataggggtaaaagaacataccgaagctgctacagctgcg
ctagatgagctttattcatatatactaactaaggttaatcttaattcctctatgatggaa
caaattgatgtattcatagaagagagtaaaatagctaacgaacaaattttagactctatt
ccaataggaatcgttgtaattgacttaaactcaaatataacttacataaatgattatgct
cttaaggtatttgaaaaggaacatgttaaatccataggtaaatctattgaaaagatagta
cataatactaaactgcctaatataatagctaatcctcaaaagcaatttgggcagattcag
catataaacggaaagattatcacagtaaatcgcagtcctatttttaacaactccaaactt
attggtgcctgtggagtttttcaagatgtatctgatatagtcggcatgaaggaattaaat
gaaaaattcaaaaaaatccttgaaagttcccatgacctaatttgctttgttgatgagaat
ggttttattaattatactaatcctgcttatgtgaattatttaggggatagttccaactat
ttaggcaaaagcatttttgatatatcccaagatggattgagagttaaagtttttaatact
aaagaaagagttgaaaatgttgtccatacaaaaaataatatagatattatttctacagtc
actcctttatttatagatggagaattcaaaggagttttatctacctccaaggtaatttct
gagatgaaggacttagttaataaactagagttatctgaagaacaacttaagtattataaa
gaagagcttttaaaacacactcttaactcaaaagctttcagcggaataattggaataagt
tcctctttaaaagatattttatatatttctcaaaaagcttctgaaagtacttctacagtt
ttaatacgaggtgatagtggaacaggaaaagagcttatagctagtgctatccatcaaaat
tcaaatagaaacaataaaccttttataaaagtgaattgtgctgctatacctgataacttg
ttagaaagtgaattgtttggtttcgagaaaggttcctttacaggtgcaattaaatcaaaa
cctggtaagtttactatagctgacggcggaactattttcttagatgaaataggcgatatg
ccactatctatgcaggtgaagttacttagagttcttcaagaaagagaagttgaaagcata
ggtggaattgcaccacaaaagatagatgttagagtaattgctgcaactcacagaaactta
gaagaaatgattaaaaacggagaatttagagaggatttatattataggcttaatgttcta
tgcattcaacttcctccactaaaagatagaaaagaagatattcctgatttagtagagttt
tttatacacaaaatgaactctcgattaaataaaaatataaaaggaataactaaagaagct
ttaaatcatcttataaattactcttggcctggtaatatacgtgagttagaaaatataatt
gaaagagctattaacctatcttcaagagacataataactccaagagatctcccctactat
tttagagaagatggaaaacataaagaaagtctcttaccgcttgatcaagatgaacttcta
actttcgaagagtacgaaaagataattatagaaaaggccatgaaagtttatggtagttat
aataaggctggtaaagccttaggtttaactcatagaaccatatctttgaagtgtaaaaaa
tacggaattgaagttaataaatag
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