Chryseobacterium indologenes: CEQ15_00275
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Entry
CEQ15_00275 CDS
T04932
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cio
Chryseobacterium indologenes
Pathway
cio03030
DNA replication
cio03410
Base excision repair
cio03420
Nucleotide excision repair
cio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEQ15_00275
03410 Base excision repair
CEQ15_00275
03420 Nucleotide excision repair
CEQ15_00275
03440 Homologous recombination
CEQ15_00275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cio03032
]
CEQ15_00275
03400 DNA repair and recombination proteins [BR:
cio03400
]
CEQ15_00275
Enzymes [BR:
cio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEQ15_00275
DNA replication proteins [BR:
cio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CEQ15_00275
DNA repair and recombination proteins [BR:
cio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CEQ15_00275
NER (nucleotide excision repair)
GGR (global genome repair) factors
CEQ15_00275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
RNase_H_2
HHH_5
DUF2202
DUF1198
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ASE60073
LinkDB
All DBs
Position
52699..55533
Genome browser
AA seq
944 aa
AA seq
DB search
MDATQDKRLFLIDAYAMIFRGYYALIRNPRLTSKGLDTSAIFGFTNSLIELIRREKPTHL
AVVFDVGQASVRTEDFADYKANRSETPEAIKIAIPYIHKILQAMHIPILGVEGYEADDVI
GTIACKAEKEGYTTFMVTPDKDFAQLVTDKIKIYKPGLKGGDIEILGVDEVKAKYEIEDP
KQVIDFLAMMGDAVDNIPGLEGVGEKTAMKFLKEFGNIETLLANTDKLKGKLKEKVEASA
ERGILSKKLATIICDAPIEFHQEQYDLETPDFEKVKEVFDEIEFRRLYENLYRAFAPAPT
ETIVVSEVEVKQTPAGTEVKGQVMQLDLFANFEELDQATSTKSSIEHNDHLYQFINNPKA
QKKLVANLLQQKVVCFDTETTSLNELEAELVGMSFSYKKGLAYYIPLSEDRAEALQTLEI
FRPFFEKEDLLKIAHNLKFDYKVLKQYDITVKGAMFDTMIAHYLLNPDGRHGMDYLSEIY
LNYKPVSIETIIGKKGKKQGSFRDADLRTQTDYAAEDADITFQLYELFAPQLKKENLEEL
FYTIEMPLMEVLAKMELAGISLDEKWLAQESIDLENDLKQLEATIFELSGEEFNMNSPKQ
LGDILFEKMQLDPKAKKTKTGQYATSEDVLQKLSSKHEIIKHILEYRTYQKLKSTYVDAL
PSQIDKKDNRVHTNFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFVSGEGNKIISA
DYSQIELRLIAEISGEENMIKAFQDGEDIHASTAAKLFKIPLEEVSKTQRSQAKTVNFGI
IYGQGAFALAEQTGLSRTEAKQMIEAYFETYPKLKEYMAEQVSKARQLGYVETILGRKRH
LKDINSNNFVVRGHAERNAVNAPVQGSAADVVKLAMIKIDRELEEQQLKTKMLLQVHDEL
VFESPVDEIETASALIRKEMESALETQVPLLVEIGVGNNWLEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaacacaagataaaaggctgtttctcatcgatgcttatgcgatgattttcaga
ggatattacgcactgataagaaatccgagactaacgagcaaaggattagatacttctgct
atttttgggtttaccaactctttgatcgaattgatcagaagagaaaaaccgactcatctg
gcagtcgtttttgatgtggggcaggcaagtgtaagaactgaagattttgcagattataaa
gccaacagaagtgaaactcctgaagccattaaaattgccattccatacattcataaaatc
ctgcaagcaatgcatattcccattctgggagtagaaggttatgaggcagatgacgtcatc
ggtaccattgcctgtaaagcagaaaaagaaggatataccacatttatggtaactcctgat
aaagactttgcacagctggttacagataaaatcaagatttataaacctggattaaaaggg
ggagatatagaaattctgggtgtagatgaggtaaaggcaaaatatgaaattgaagatccc
aaacaggtgatagacttcctggctatgatgggggatgcagtcgataatatccccggatta
gaaggtgtaggagaaaaaacagccatgaaattcctgaaagaattcggaaatattgaaact
ttactggccaataccgataaactgaaaggaaaactgaaagaaaaagtagaagcctctgca
gaacgcggtattttgtctaaaaaactcgcgacaattatctgtgatgctcctatagaattt
catcaggagcagtacgatcttgaaactcctgactttgaaaaagtaaaagaagtctttgac
gaaatagaattcagaagactctacgaaaatctgtacagggcttttgcaccagcaccaacg
gaaacaattgtggtaagtgaagtggaagtaaaacaaactcctgccggtacggaagtgaaa
gggcaggtgatgcagctcgatctttttgctaattttgaagaacttgatcaggctacttct
acaaaatcgtcgattgaacataacgatcatctttaccagtttattaacaatccaaaagct
cagaaaaaattagtagccaatctcctgcaacaaaaagtagtttgttttgataccgaaaca
acctcattaaacgaattggaagctgagctggtaggaatgagtttttcgtataaaaaaggt
cttgcctattatattcctttgtctgaagacagggctgaggcattgcagacccttgaaatt
ttcagaccgttttttgaaaaagaagatctgctgaaaattgcccataatttaaagtttgat
tataaagtcttaaagcaatacgatattaccgttaaaggagccatgtttgataccatgatt
gcccattatttgctgaatccggacggaagacacggcatggattacctttcagagatatat
ctgaactacaaaccggtatccatcgagactattattggtaaaaaagggaaaaaacagggt
agcttcagagatgcagatcttagaacacaaactgactatgcagcagaagatgccgatatc
actttccagttatacgagctgtttgcaccccaactgaaaaaagaaaaccttgaagagctt
ttctatactattgaaatgcctttgatggaagttcttgcgaaaatggaactggccggaatt
tcccttgacgaaaaatggctggcacaggaaagtattgatctggaaaacgatcttaaacaa
ttggaagccaccatttttgaactttcaggagaagaatttaatatgaattcacctaaacag
ttaggcgacattctgtttgaaaaaatgcagcttgacccgaaagcaaagaaaacaaaaaca
ggacaatatgccacttcagaagatgtgcttcagaaactgtcttcaaaacatgaaatcatc
aagcatatcctggagtacagaacttaccagaaattaaaatcaacctatgtggatgctttg
ccttcacagattgataaaaaggataacagggtacataccaacttctcacagaccaccgcg
gcaacaggccgtttggctagtgtaaatcctaacctgcagaatattccgatcagaacattg
agaggtcagcagattcgtggagcgttcgtttcaggagaaggaaacaaaatcatttctgcc
gattactcacaaattgaacttcgtcttatcgctgaaatttccggtgaagaaaatatgatt
aaagctttccaggatggagaagatattcacgcttccactgctgctaaattatttaaaatt
ccgttggaagaagtatccaaaacacagagaagccaggccaagactgtaaacttcgggatc
atctacggacagggagcttttgccctggcagaacaaaccggattatcccgtaccgaagcc
aaacaaatgatcgaagcctattttgaaacctatccgaaactgaaagaatatatggctgag
caggtaagcaaggcccgtcagttaggttatgtggaaaccattttaggaagaaaaagacat
ttaaaggatatcaattccaataattttgtggtaagaggtcatgctgaaagaaatgctgta
aacgcccctgtccagggaagtgctgcagatgtagtgaaattagctatgattaaaatcgac
agagaactggaagaacaacagctgaagactaaaatgttacttcaggtacatgatgaattg
gtctttgaatctccggttgacgaaattgaaacggcttcagctttgatcagaaaagaaatg
gaaagtgctttggaaacacaggttcctttattggttgaaattggagtggggaataactgg
ttagaagcccattag
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