Chryseobacterium indologenes: CEQ15_08405
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Entry
CEQ15_08405 CDS
T04932
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
cio
Chryseobacterium indologenes
Brite
KEGG Orthology (KO) [BR:
cio00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CEQ15_08405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
YqgF
T2SSK
HHH
S1_RRP5
HHH_5
HHH_6
HHH_2
Spt6_S1
DUF7491
ATP-synt_ab_C
Motif
Other DBs
NCBI-ProteinID:
ASE61511
LinkDB
All DBs
Position
1839279..1841402
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AA seq
707 aa
AA seq
DB search
MTTVEFIQKQLNISEKSINNTLQLLAEDCTIPFISRYRKDKTGNLDETQIEQISKISKQF
EEIVKRKESILKSIDEQKALTPELRQRIQESFDIQELEDLYLPFKKRKKTKADAAKEKGL
EPLARIIMSQKNNDLLFLASKYLNQDVSSEEEALQGARDIMAEWINENMYVRKNLRRIFQ
RKAVITSKVVKAKKEDDDAQKFSQYFEWEENLSRTPSHRLLAMLRAESEGFVKTNVEIDK
EEAIDFIEKAIIKSNNESSEQIALAIKDSYKRLLEPAISNEALQEAKEKADQKAIEIFSE
NLGQLLLAPPLGEKRILAIDPGYRSGCKVVCLDEKGDLLHNETLYPHAPQNESGMAMKKI
RSMVNAYNIEAISIGNGTASRETEFFIKKIAFDKPLQVFVVSEAGASVYSASKIARDEFP
SYDVTVRGAVSIGRRLSDPLAELVKIDPKSIGVGQYQHDVDQTLLKNELDSTVMKCVNSV
GINLNTASKSLLSYVSGIGEKMAENIVNYRAENGAFEDRKQLKKVPRLGEKAFQQAAAFV
RISNAKNPLDNSAVHPEAYGIVEKMAKNLGIKTDELIANKEKIAQIKAENYITEEIGILG
IKDILKELEKPGLDPRKAAKVFEFDPNVKSIKDLKAGMILPGIVNNITAFGCFVDLGIKE
SGLVHISQLKDGFVSDVNEVVKLHQHVRVKVTEVDEARKRVQLSMIL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgtagaatttatacagaagcagctcaatatttctgaaaagagcatcaacaat
acgttacaattattagcagaagactgcactattccttttatttcccgttatcgtaaggac
aaaacaggaaatcttgacgaaacccagatcgagcagatttcaaaaatcagcaaacagttt
gaggaaattgtcaaaagaaaagaatcgatcttaaaatccattgatgaacagaaggcttta
acaccggaactccgacaaagaattcaggaaagctttgatatacaggaattggaagacctc
taccttcctttcaaaaaacgcaagaaaacaaaagctgatgcagccaaggaaaaaggactt
gaacctttagccagaatcattatgagccaaaaaaacaatgacctattgtttctggcgtca
aaatacctgaatcaagacgtttcttcagaagaggaagcactgcagggtgccagagatatt
atggctgaatggatcaacgaaaatatgtatgtgcgtaaaaatctgcgccgcatatttcaa
cgcaaagctgtcatcacctctaaggtggtaaaggctaaaaaagaagatgatgatgcccag
aaattttcccaatattttgaatgggaagaaaacctcagcagaacaccctctcacaggctt
ttggcgatgctgagagcggaatcggaaggctttgtgaaaaccaatgtggaaattgacaaa
gaggaagccatcgattttattgaaaaagcaattatcaagtccaataacgaaagttctgaa
cagattgcattggccataaaagacagctataaaaggcttttagaacctgctatttccaat
gaggctttgcaggaagcgaaagaaaaagcagaccagaaagctatcgaaatattttctgaa
aaccttggtcagcttctgttagctcctcctttgggtgaaaaaagaattctggctattgat
cccggatacagaagcggatgtaaagtagtttgccttgatgaaaagggagatttacttcat
aacgagaccctctaccctcacgcccctcagaacgagagcggcatggcaatgaaaaaaatc
cgttcgatggtcaacgcttacaatattgaagcaatttctatcggaaacggtactgcaagc
cgtgaaactgaattttttatcaagaaaatagcttttgataagccattacaggttttcgta
gtctctgaggccggagcatcggtttattccgcaagtaaaattgcaagggacgaattccct
tcatatgatgtgacggtgcgtggtgccgtgtctatcggaagacgtctttctgatccgctg
gcagaattggtaaagattgatcccaaatctataggcgtaggtcaataccagcatgatgtg
gaccagacccttctgaaaaatgaactggactcaacggtcatgaaatgtgtgaactcagta
ggaatcaatttaaatacagcgagtaaatcattattaagctatgtttccggaatcggagag
aaaatggctgaaaacattgtcaattatcgcgctgaaaacggggctttcgaagaccgaaaa
caattgaaaaaagttccaagactgggagaaaaagcttttcaacaggcagcagcttttgta
agaatctcaaatgcaaaaaatccgttggataattctgcggtacacccggaagcctatgga
attgttgaaaaaatggcaaaaaatctaggtattaaaacggatgaacttattgccaataag
gaaaaaatcgctcaaataaaggctgaaaattatattacagaagagatcggaatcttaggc
atcaaagatattttaaaagaacttgaaaaacctggattagatcccagaaaagcggctaaa
gtttttgaatttgatcctaatgtaaaaagcatcaaagaccttaaagccggcatgatactt
ccgggaattgttaataatattaccgcattcggatgttttgtagatctgggaatcaaagaa
agtggcttggtgcatatttcccaattgaaagacgggtttgtgtctgatgtgaatgaagtc
gtaaaacttcaccaacatgtaagggtaaaagttacagaagtggatgaagccagaaaaaga
gttcaactgagtatgattctgtaa
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