Chryseobacterium indologenes: CEQ15_11845
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Entry
CEQ15_11845 CDS
T04932
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cio
Chryseobacterium indologenes
Brite
KEGG Orthology (KO) [BR:
cio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cio03032
]
CEQ15_11845
03400 DNA repair and recombination proteins [BR:
cio03400
]
CEQ15_11845
Enzymes [BR:
cio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CEQ15_11845
DNA replication proteins [BR:
cio03032
]
Prokaryotic type
DNA Topoisomerases
CEQ15_11845
DNA repair and recombination proteins [BR:
cio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CEQ15_11845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ASE62134
UniProt:
A0A1Z3W371
LinkDB
All DBs
Position
2615905..2617011
Genome browser
AA seq
368 aa
AA seq
DB search
MEKNTDLEIISHLKPSKIVKIMKDPEASAKAVHLVYTTDAESAGITRKKTGKKYSYYKDG
EKIKDKDEITRINKLVIPPAWENVWICALDNGHLQATGFDIKKRKQYRYHPLWSALRNHT
KFYRMLQFGYALPEMRLHLEQDLAIRSFEKRKILALIVSLMQRTNIRIGNNVYEKLYGSF
GLTTLKDKHVQVKGQKITFSFKGKKGIMHHIDLRSKRLARLVQKCKDIPGKELFQYLDDE
GNRHSVDSGMVNEYIKEISGEDFTAKDFRTWSGTVSALIAFREIGYAESNTEYKKKVKEA
LDIVAEHLGNTSAVCRKYYVHPLVINLYENNTIKKYLDELEIIEENDGKADLTREEKLVL
KILENEKM
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaacacagatttagagatcatttctcatttaaagccatcaaagattgttaaa
atcatgaaggacccggaagcttctgcaaaggcggtacatcttgtatataccaccgatgca
gaatccgccggaattacgcgtaagaaaaccggaaaaaaatattcctattataaggatggt
gaaaaaatcaaagataaggatgaaattaccaggatcaataaactggtgatccctcccgcc
tgggaaaacgtgtggatatgcgcactggataacggccatcttcaggccacaggttttgac
atcaaaaaaagaaaacagtaccgctatcatccattatggagtgccctgcgaaaccatacc
aaattttacaggatgcttcagtttggctatgccttacccgaaatgcgacttcatctggaa
caggaccttgctataaggagctttgaaaaacggaagatactggcattgattgtaagcctt
atgcagagaactaatatacgtatcggtaataatgtatatgaaaagttatatggctcattc
ggactgactactctaaaggataaacatgtacaagttaaaggccagaaaattactttttca
tttaaaggcaaaaagggaatcatgcaccatattgacctgagaagcaaaagactggcaaga
ctggttcagaaatgtaaggatattcccgggaaagaacttttccaatatcttgatgatgaa
ggaaaccgacattctgtagattcgggaatggtgaatgagtatatcaaagaaataagtggt
gaagattttactgctaaagatttcagaacctggtccggaacggttagtgccctgattgct
tttagagaaataggatatgcagaaagcaacaccgaatataaaaagaaagttaaggaagct
ttggacattgttgcagaacatttgggcaacacttccgcagtatgcaggaaatattatgta
catccactagttatcaatctttacgaaaacaataccatcaaaaaataccttgatgaattg
gaaatcattgaagagaatgacggaaaggcagaccttacaagagaagaaaagcttgtcctc
aagattcttgagaatgaaaagatgtaa
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