Chryseobacterium indologenes: CEQ15_12300
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Entry
CEQ15_12300 CDS
T04932
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
cio
Chryseobacterium indologenes
Pathway
cio03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CEQ15_12300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cio03400
]
CEQ15_12300
DNA repair and recombination proteins [BR:
cio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CEQ15_12300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
DUF4404
Motif
Other DBs
NCBI-ProteinID:
ASE62221
LinkDB
All DBs
Position
2711899..2714046
Genome browser
AA seq
715 aa
AA seq
DB search
MYIDKEDLDELEFPQLLAEISPFAYSPKTREKILQLRPMEIDEAELSLKKTSEYLSSFES
SNAIPFDEYEDIESELKLMLIENYRLENSAFIKIKTLTEQIGRLQKFFPTMPETFPVLME
EVSVLEFRKEIIEKVDKVFNRFGEVKSEASPVLKGLRTEIQHAKKAIQENFNRALTTYGQ
SDFLDDIRETIIDDQRVLAVKSGFKKRVPGRTLGISKTGSITYIQPDSVVKHYFKLRENE
EEEKKEIDKVLRKLTADLAEFQPQLWRYQMYIFDLDLTRAKAKFSESINGVLPKINRHKT
LKLKDAYHPLLWLRNKVENKTIFPQTLSLTEHNRIICISGPNAGGKSITLKTVGLLQLMI
QSGILVPVHPKSEMFFFEKMMTDIGDNQSIENHLSTYSSRLKKMSGIIREADADTLLLID
EFGTGSDPELGGALAESFMEYFYDKKSFAIITTHYTNIKLVIEQLPNAQNAAMLFNEETL
EPMYKLEVGQAGSSFTFEVAEKNKIPRFIIHSAKKKVEHDIVNLDKTIVKLQQEKFEVEK
LKSDLAERKESVEDKRDNLQKLNDQLQQKLFNFQKLYEEEHRKLQFGNKIETFIDSYTKG
KSRKDVVKDFVKLLEQEKFRKLGSDKDETKRLQVVKRKITQQLKKEEVIEKIAETNERLE
EKRKTDREVWMKVGQRVRITGSTSVGTIEKISRNKVVVNYGTFKTTIDADELERI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgtatatagataaagaagatttagacgaattagagtttccgcaattgctcgcggaaatc
tccccatttgcgtattctccgaaaacaagagaaaaaattcttcaacttcgtccgatggaa
attgacgaggcggaactttcgttaaaaaaaacgtcagaatacctgtcgagttttgaaagt
tcaaatgcgattccgtttgatgaatatgaggatattgaaagtgagctgaaattgatgctt
atcgagaattaccgtctggaaaacagtgctttcatcaaaataaaaacccttacggagcaa
atcggaaggcttcagaagtttttccctaccatgcctgaaaccttccctgttttgatggaa
gaagtttccgttctggaattcagaaaagaaatcattgaaaaagtagataaagtttttaac
cgttttggtgaggtaaaaagcgaagcttcccctgtattaaaaggattgagaacagaaatc
cagcatgctaaaaaagcgatccaggaaaatttcaacagagcactcaccacctatggacag
agcgactttttggatgacataagggaaacaattattgatgaccagagggtactggctgta
aaatcaggtttcaaaaagagagttccgggaagaactttgggaatttcaaaaacaggttct
atcacttatatccagccggatagtgtggtaaaacattattttaaacttcgggaaaacgaa
gaagaagagaaaaaagagattgataaggttctcagaaaacttactgctgatcttgcagaa
tttcagcctcagctatggagatatcagatgtatatttttgatctggacctgacaagggct
aaagcaaaattcagtgaatccatcaatggagtgcttcctaagatcaaccgccacaaaaca
ctgaagttaaaagatgcttaccatcctttgctatggcttagaaataaggtggaaaataaa
actattttccctcaaaccctgtcgttaacggagcacaacaggattatctgtatttccggt
ccgaatgccggaggaaaatccattaccctgaaaactgtaggattgttgcagctgatgatt
cagagcggtattctggtgcctgtgcatccaaaatcggagatgtttttctttgagaagatg
atgacggatattggtgataatcaatctattgagaaccacctttccacgtattcttcaaga
ctgaagaagatgtcgggaatcatccgcgaagcagatgcagataccctcctattaattgat
gagtttggtacaggttctgatccggaacttggaggtgccttggccgaaagctttatggaa
tatttctatgacaaaaagagttttgccatcattaccacacactacaccaatattaaactg
gtgattgagcaacttccgaatgctcagaatgcggcaatgctttttaacgaagagaccctg
gaacccatgtacaaactggaagtaggtcaggcaggaagttcatttacttttgaagtggct
gaaaagaataaaattccaaggtttatcatccattcggcgaagaaaaaagtagagcatgac
attgtcaaccttgataaaacgattgtcaaacttcagcaggaaaaatttgaagttgaaaaa
ctgaaatctgatcttgcagaaagaaaagaatctgtagaagacaaacgcgataatcttcag
aagcttaatgaccagcttcagcagaagttattcaactttcagaagctgtatgaggaagaa
catcgtaaacttcagtttggaaataaaattgaaacgttcatcgacagttacaccaagggt
aaatcacgaaaagacgttgtcaaagattttgtaaaattactggagcaggaaaagttcaga
aaactgggcagtgataaggatgaaacgaaacgtcttcaggtggttaagagaaagatcacc
caacagcttaaaaaggaagaagtgattgaaaaaattgctgaaaccaatgaaagactggaa
gagaaacgcaaaaccgatcgcgaagtctggatgaaggtaggacagagagttcgtataacg
ggaagtacaagcgtaggaactattgagaaaatctcaagaaacaaggtagttgttaattac
ggaactttcaaaactacgattgatgcggatgaacttgagagaatttaa
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