Chryseobacterium indologenes: CEQ15_13970
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Entry
CEQ15_13970 CDS
T04932
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cio
Chryseobacterium indologenes
Pathway
cio03030
DNA replication
cio03430
Mismatch repair
cio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEQ15_13970
03430 Mismatch repair
CEQ15_13970
03440 Homologous recombination
CEQ15_13970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cio03032
]
CEQ15_13970
03400 DNA repair and recombination proteins [BR:
cio03400
]
CEQ15_13970
Enzymes [BR:
cio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEQ15_13970
DNA replication proteins [BR:
cio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEQ15_13970
DNA repair and recombination proteins [BR:
cio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEQ15_13970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ASE62524
UniProt:
A0A4U8VLL5
LinkDB
All DBs
Position
3079811..3080575
Genome browser
AA seq
254 aa
AA seq
DB search
MNLKLHKPLCVFDLETTGTNIGKDRIVEICILKVNPDASRESKTWRVNPEMPIPKESSDI
HGIYDQDVKDAPTFRDIAPKIMEMLAGTDLGGFNSNRFDVPLLAEELLRVGMDFDLSKFR
LVDAQTIFHKKEPRNLGAAYQFYCGKTLENAHSAEADVMATFEVLDAQVGKYDDIPNEIA
PLSEFTFHNKHADLAGFIGYNEKLEEVFNFGKYKGQCVKVIFQKDLGYFGWLQNADFPLY
TKKIFTKIQLSSKF
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaaactccataaacctctttgcgtatttgaccttgaaaccacaggaaccaat
atcggaaaagacagaatcgttgaaatctgcattttaaaagtaaatcctgatgcttccaga
gaaagcaaaacatggcgtgtaaatcctgaaatgccgatcccgaaagaaagcagtgacatc
cacggaatctatgatcaagatgtaaaagatgctccaactttcagagatatcgctcctaaa
attatggaaatgcttgcaggcactgatctgggaggattcaattcgaacaggtttgatgtt
ccccttttggctgaagagcttttaagggtaggtatggattttgatctgagtaaattcaga
ttggtggatgcgcaaactatttttcataaaaaagagcccagaaacttaggagctgcttat
cagttttattgtggaaaaacattggaaaatgcacactcggctgaagctgatgtcatggct
acttttgaagttctggatgcccaggtgggtaaatatgatgacatcccgaatgaaattgca
ccgttaagtgaatttacctttcataataagcatgctgatcttgccgggtttatcggatat
aacgaaaaacttgaagaggtgttcaacttcggaaagtacaaaggacagtgtgtaaaagta
atatttcagaaagatctggggtatttcggatggcttcagaatgctgatttccctttatac
accaaaaagatttttacaaagattcaattatcaagtaaattttaa
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