Chryseobacterium indologenes: CEQ15_15845
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Entry
CEQ15_15845 CDS
T04932
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
cio
Chryseobacterium indologenes
Pathway
cio03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CEQ15_15845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cio03400
]
CEQ15_15845
DNA repair and recombination proteins [BR:
cio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CEQ15_15845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ASE62857
UniProt:
A0A4U8VLC4
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All DBs
Position
3520636..3521421
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AA seq
261 aa
AA seq
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MKAIWNGAIGFGLVNIPVKIYSATETTKLDLDMLDKSDFSNIRFKRVNENTGKEVKWENI
VKGFLMDDKYIVLDEEDYAAASPEKTKILSIDQFVKESEVDSVYFETPYYLEPQKNGENA
YRLLLKALEETQMVGIGTFVLRETETIGMIRPYKDNILVLNRLRFDQEIRDYTDLKLPAQ
KAPKPAELKMAVSLIKQLSQEFDPALYKDTYSDELMKIIKQKAKGKNVKAKKAEPAKEGK
VIDLMAQLKASLSSSKSKSAS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaatatggaatggcgccattggcttcggtttagtaaacattcccgtgaagatt
tactctgctactgaaaccacaaaactggacctagacatgcttgataaatccgatttttcc
aatatccggttcaagcgtgtaaacgagaatacgggaaaagaagtaaaatgggaaaatatt
gtcaaaggttttcttatggatgataaatatatcgtccttgatgaagaggattatgcagct
gcaagccctgaaaaaacaaaaatactttctatcgatcagtttgtaaaagaatcggaagta
gacagcgtttattttgaaacaccttattatctggaacctcagaaaaatggggaaaacgct
tataggctcctgttaaaagctcttgaagaaacccaaatggtaggcatcggaacttttgta
ctccgggaaacggaaaccatcggtatgattcgaccatataaagataatatcctggttctg
aatcgtctcagatttgatcaggaaatcagagattacacagatttaaaactacccgcacag
aaagcacctaaaccggcagagctcaaaatggcagtcagtcttatcaaacaactttctcag
gaatttgatcctgccctatataaagatacttattctgatgaactgatgaaaatcattaaa
cagaaagcgaaaggtaaaaatgtaaaagctaaaaaagcagagcctgcaaaagagggtaaa
gtaattgacctgatggcgcaactgaaggccagcttaagcagttccaaatctaaatccgca
tcataa
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