Chryseobacterium indologenes: CEQ15_20555
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Entry
CEQ15_20555 CDS
T04932
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cio
Chryseobacterium indologenes
Pathway
cio03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cio00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEQ15_20555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cio03021
]
CEQ15_20555
03400 DNA repair and recombination proteins [BR:
cio03400
]
CEQ15_20555
Enzymes [BR:
cio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEQ15_20555
Transcription machinery [BR:
cio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEQ15_20555
DNA repair and recombination proteins [BR:
cio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEQ15_20555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ASE63705
UniProt:
A0A1Z3W7H6
LinkDB
All DBs
Position
4562360..4563355
Genome browser
AA seq
331 aa
AA seq
DB search
MAILQFIKPDKVILLNSDEFKGQFEFRPLEPGFGLTIGNALRRVLLSSLEGYAISSIKIE
GVEHEFSTIPGVIEDVTEIILNLKQVRLKAAAEGQANEQVVAKVSGQTIITAGDLGKSIN
GFEVLNPDLVICNLNSDVTFEITFNIEKGRGYVPSEQNKSNNAPVGTIAIDSIFTPIKKV
QYSIENYRVEQKTDYEKLVLDIETDGSISPQNALTEASKILIYHFMLFSDERITLETEAV
KASIQYDEETLHTRQLLKSKLADMDLSVRALNCLKAAEVETLGELVSYSKSDLMKFRNFG
KKSLTELEELVHSKGLNFGFDVAKYKLDADK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttacaattcataaaacccgataaagtaattttacttaactctgatgaattt
aaaggtcaatttgaattcagacctttagaaccaggtttcgggcttacaatcggtaatgct
ttgagaagagtgttgctttcttctctggaaggatatgctatttcatctatcaaaatagaa
ggtgtagagcacgaattttcaaccattccaggagtaatcgaagacgttaccgaaattatt
cttaacctaaagcaggttagattaaaagctgcagcagaaggccaggctaacgagcaggtt
gttgctaaagtttcaggtcaaacgattattactgctggagatttaggaaagtcgatcaac
ggattcgaggtactaaacccggatttagtgatttgtaacctaaacagtgatgtaactttc
gaaattactttcaatattgaaaaaggtagaggatatgttccttcagaacaaaataagtca
aacaatgctcctgtaggtactattgctattgactctattttcacgccgatcaagaaagta
caatacagcattgaaaattatcgtgtagagcaaaaaacagactacgaaaaacttgtatta
gatatagaaactgacgggtctatcagccctcagaatgctttaactgaagcttctaagata
ttaatctatcacttcatgttgttctctgatgagagaatcacacttgaaactgaagccgta
aaagcatctatccaatatgacgaggaaactcttcatacaagacaactacttaagtctaaa
ttagcagatatggatctttctgtaagagcccttaactgtctgaaagcagctgaagtagaa
actcttggagaattggtttcttacagtaagtctgatttgatgaaattcagaaattttggt
aaaaaatctttgacagaactagaagaattagtgcattcaaaaggtcttaacttcggtttc
gacgttgcaaaatataagttagacgctgataaataa
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